Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02558 ATGGGAAACTGCTGCAGATCTCCGGCCGCCGTCGCCCGCGAGGACGTCAAATCCAGCTTCTCCGACCACCACGCTAAGCGTGCTGCTGCTGGAGACTCCTCCGCCGCCGGAGGCACCGGTGGGAAGAAGAAGCCTCCTCCGATCACCGTCCTCACCGGCGTTCCCAAAGAGAACATCGAGGACCGGTACCTAGTAGACCGCGAGCTCGGCCGTGGCGAGTTCGGTGTGACGTACCTCTGCATCGACCGCGAGACGCGGGAGTTGCTCGCGTGCAAGAGCATCTCGAAGCGGAAGCTCCGCACTGCCGTGGACGTTGAGGACGTCCGCCGCGAGGTGGCGATCATGCGCCACCTGCCGCGAAGCCCGTCCATCGTGTCGCTCCGGGAGGCCTGCGAGGATGACAATGCAGTCCATCTCGTCATGGAACTCTGTGAGGGCGGTGAGCTCTTTGACCGAATCGTTGCCAGGGGTCATTATACGGAGAGGGCGGCCGCAGCGGTTGCACGGACCATCGTGGAGGTAGTGCAGCTTTGCCACAAGCACGGGGTGATCCACAGGGACCTCAAGCCAGAGAATTTCTTGTTTGCTAATAAGAAGGAGAACTCGCCTCTCAAGGCTATCGATTTTGGGTTGTCCATATTCTTCAAGCCAGGTGAGAGGTTCTCAGAAATTGTTGGAAGTCCTTATTATATGGCTCCAGAGGTGCTCAAGCGGAACTATGGGCCAGAGATAGATATATGGAGTGCGGGAGTGATTCTCTATATCTTATTGTGTGGTGTTCCCCCATTTTGGGCTGAATCTGAACAAGGGGTTGCACAGGCCATTCTTCGAGGGCTTATAGATTTCAAACGGGAACCTTGGCCCAGTATTTCTGAAAGTGCTAAAAGTCTTGTTAGGCAAATGTTAGAACCAGACCCTAAGCTTCGGTTAACTGCCAAACAAGTGCTCGAGCATCCTTGGCTACAAAATGCTAAAAAGGCTCCTAATGTTCCTCTTGGAGATGTTGTCAAGTCAAGGCTTAAGCAATTTTCGATGATGAACAGATTCAAAAGAAAAGCCCTTAGGGTCATTGCTGATTTCTTATCTAATGAAGAAGTTGAAGACATTAAAGATATGTTCAAGAAAATGGATAGTGATAATGATGGTATCGTTTCCATTGAAGAATTGAAAGCTGGATTTCAAAATTCTGGATCCCAACTTGCTGAGTCTGAAGTTCAGATGTTTATTGAGGCTGTAGATAATAACGGGAAGGGAACACTTGACTACGGAGAATTTGTTGCTGTTTCTCTTCATTTAAAAAGGATGGCTAACGATGAGCATCTTCGCAAGGCCTTCTCATATTTTGACAAGGATGGGAATGGATATATTGAACCTGAAGAGCTACGAAATGCCTTAATGGAAGATGGAGCAGACGATTGTACAGATGTAGCAAATGATATTTTCCAAGAAGTAGACACGGACAAGGATGGACGTATCAGCTATGATGAGTTTGTGGCTATGATGAAAACTGGAACAGATTGGCGGAAAGCATCTAGGCATTACTCACGCGGTAGATTCAACAGCTTGAGCTTGAAATTGATGAAAGACGGTTCTTTAAACATAGGAAATGAGCAGTTATCTTGA 1623 0.4886 MGNCCRSPAAVAREDVKSSFSDHHAKRAAAGDSSAAGGTGGKKKPPPITVLTGVPKENIEDRYLVDRELGRGEFGVTYLCIDRETRELLACKSISKRKLRTAVDVEDVRREVAIMRHLPRSPSIVSLREACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVARTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKREPWPSISESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIADFLSNEEVEDIKDMFKKMDSDNDGIVSIEELKAGFQNSGSQLAESEVQMFIEAVDNNGKGTLDYGEFVAVSLHLKRMANDEHLRKAFSYFDKDGNGYIEPEELRNALMEDGADDCTDVANDIFQEVDTDKDGRISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLMKDGSLNIGNEQLS 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02558 540 ProSiteProfiles EF-hand calcium-binding domain profile. 364 399 IPR002048 GO:0005509
Arst4g02558 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Arst4g02558 540 FunFam calcium-dependent protein kinase 13 149 329 - -
Arst4g02558 540 SUPERFAMILY EF-hand 350 528 IPR011992 -
Arst4g02558 540 SUPERFAMILY Protein kinase-like (PK-like) 48 346 IPR011009 -
Arst4g02558 540 Pfam EF-hand domain pair 367 427 IPR002048 GO:0005509
Arst4g02558 540 Pfam EF-hand domain pair 439 502 IPR002048 GO:0005509
Arst4g02558 540 MobiDBLite consensus disorder prediction 15 49 - -
Arst4g02558 540 ProSiteProfiles EF-hand calcium-binding domain profile. 436 471 IPR002048 GO:0005509
Arst4g02558 540 ProSiteProfiles Protein kinase domain profile. 63 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g02558 540 CDD STKc_CAMK 62 320 - -
Arst4g02558 540 FunFam Calcium-dependent protein kinase 1 65 148 - -
Arst4g02558 540 ProSiteProfiles EF-hand calcium-binding domain profile. 400 435 IPR002048 GO:0005509
Arst4g02558 540 SMART efh_1 404 432 IPR002048 GO:0005509
Arst4g02558 540 SMART efh_1 368 396 IPR002048 GO:0005509
Arst4g02558 540 SMART efh_1 476 504 IPR002048 GO:0005509
Arst4g02558 540 SMART efh_1 440 468 IPR002048 GO:0005509
Arst4g02558 540 SMART serkin_6 63 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g02558 540 PANTHER SERINE/THREONINE-PROTEIN KINASE 56 497 - -
Arst4g02558 540 ProSitePatterns EF-hand calcium-binding domain. 377 389 IPR018247 -
Arst4g02558 540 ProSitePatterns EF-hand calcium-binding domain. 485 497 IPR018247 -
Arst4g02558 540 CDD EFh 440 502 IPR002048 GO:0005509
Arst4g02558 540 Gene3D Phosphorylase Kinase; domain 1 64 148 - -
Arst4g02558 540 ProSiteProfiles EF-hand calcium-binding domain profile. 472 507 IPR002048 GO:0005509
Arst4g02558 540 Gene3D Transferase(Phosphotransferase) domain 1 149 329 - -
Arst4g02558 540 FunFam Calcium-dependent protein kinase 7 330 505 - -
Arst4g02558 540 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Arst4g02558 540 Gene3D - 330 505 - -
Arst4g02558 540 Pfam Protein kinase domain 65 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g02558 540 ProSitePatterns EF-hand calcium-binding domain. 449 461 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02558 Arst-Chr4 93000705 93005699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02558 1 534 EF-hand Containing Proteins AT1G74740 68.352 0.0 756
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Arst4g02558 Pkinase 2.8e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02558 K13412 - gmx:100783922 992.26