Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02553 ATGTACCTTGGAAAACATCACCCTCCTTGTCAGAACATGGTCTTGGGCCTCAGACCCCAAAAGAAAAGAGCAGTTATGGGTTCCACTCGCTCAGATGGCTCTGCCAATGGCAAAGAACGCCTACGCTGGACACACGAACTCCATGATCGCTTTGTGCACGCTGTAAATAGGCTTGGGGGCCCTGATAGGGCAACACCAAAGGGTATATTGAAGGGGATGAAGGCCATGGGTGTTTCTGATCTCAGCATTTATCATGTCAAAAGTCACTTGCAGAAATACCGGATCTCCAAATTGATTCCAGAGTCTACCTCAAAAGGAAAGCCTGAGAAGAGAAGCATATCAAATACACTGCCAAATTTCAGTTCTACATGTGCTCTTCAGCTGAAGGAAATTCTTCAAATTCAGAGGGAGGTGCGAAACCGCTTGAGTGATCAAGCAGAGGTTCAGAGAAGGTTGAAGCAAAAAATTGAAGCACAAGAGAAATACCTTGATAGAATTGGACAAAGCCATGAAAGCAGAACAACAATCACTAGAAAATCTTCCAAGCCATCATCATTTTGTGCTACAAATAATAATAATAATAAACATCTCCCTTCTCTCTCTGAGGAATCAGAATCTATTATTGAGACACACCCTGAAGAAGTAGTAGAAGAAGAGGAAGAGCATCAATCATGTTCCAAAAGACAAAGGGTAGTAATAGATGAACATGTTTTTCCATCAAGCTTTGAACTTGAACTAGAATCATCCACCACCACAGAATTCATTGATCAATCATGGAATCTTTCATGGAGTCAACTTGCAGCTGCATGTGAATCACCTTTGATGCCAGGATTCTTATTATAA 843 0.4164 MYLGKHHPPCQNMVLGLRPQKKRAVMGSTRSDGSANGKERLRWTHELHDRFVHAVNRLGGPDRATPKGILKGMKAMGVSDLSIYHVKSHLQKYRISKLIPESTSKGKPEKRSISNTLPNFSSTCALQLKEILQIQREVRNRLSDQAEVQRRLKQKIEAQEKYLDRIGQSHESRTTITRKSSKPSSFCATNNNNNKHLPSLSEESESIIETHPEEVVEEEEEHQSCSKRQRVVIDEHVFPSSFELELESSTTTEFIDQSWNLSWSQLAAACESPLMPGFLL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02553 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 98 IPR017930 -
Arst4g02553 280 Pfam MYB-CC type transfactor, LHEQLE motif 127 166 IPR025756 -
Arst4g02553 280 SUPERFAMILY Homeodomain-like 38 95 IPR009057 -
Arst4g02553 280 FunFam Myb family transcription factor 37 98 - -
Arst4g02553 280 Coils Coil 139 159 - -
Arst4g02553 280 Gene3D - 37 98 - -
Arst4g02553 280 MobiDBLite consensus disorder prediction 169 205 - -
Arst4g02553 280 MobiDBLite consensus disorder prediction 178 205 - -
Arst4g02553 280 NCBIfam myb-like DNA-binding domain, SHAQKYF class 38 96 IPR006447 GO:0003677
Arst4g02553 280 Pfam Myb-like DNA-binding domain 41 94 IPR001005 -
Arst4g02553 280 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 34 227 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02553 Arst-Chr4 92349780 92354272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02553 23 185 G2-like Transcription Factor Family AT4G28610 43.195 1.61e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst4g02553 Myb_DNA-binding 6.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02553 - - aip:107639556 464.151