Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02549 ATGGGTGTCGACTACTACAAGATTCTTGATGTCGATAGAAACGCTAAAGACGATGATCTCAAGAAGGCGTATCGAAAGCTTGCAATGAAGTGGCACCCTGATAAGAACCCTAACAACAAGAAGGACGCTGAAGCCAAATTCAAGCAAATCTCTGAAGCCTATGATATTTTGAGTGATCCTCAGAAGCGTGCAGTTTATGATCAGTATGGTGAGGAGGGGCTGAAGGGGCAGGTACCACCACCAGGTGGTGGCAGTGACAGCAGTTCTGCGAATTTCCAGTTCAATCCCAGAAGTGCAGATGATATATTTTCGGAGTTCTTTGGTTTCTCCAGTTCATTTGGTGGAATGGGGGACATGGGTGGTCGTGCTGGCGCATCTAGCTTTTCCAGGGGCGGCATGTTTGGTGATGATATCTTTTCTCAGTTTAGGAGTGGAGCTGGAGAGGGCTCTGCCCATATGCCAAGGAAAAGTGCACCAATAGAGATAATATTGCAATGTAGCTTGGAGGATTTGTATAAAGGGACATCGAAAAAGATGAAGATTTCGAGGGATGTTATTGATGCCAATGGAAAGCCCACCAAAGTAGAGGAAATCCTTACAATTGAGATCAAGCCAGGTTGGAAGAAAGGAACAAAAATAACTTTTCCAGCGAAGGGAAATGAGCAAAGAGGACATATCCCCGCAGACCTTGTGTTCATCATCGACGAGAAGCCGCATAGTGTCTTCAAGAGGGATGGCAATGATCTTGTTTTCACCCAGAAGGTATCCCTTGTAGAAGCTCTAACAGGTTACACGGTGCAGCTGACAACCCTTGACGGCCGAAACCTTACCATCCCCGTTAATTCAATCGTTAGTCCGTCTTACGAAGAAGTCGTTAAAGGAGAGGGCATGCCAATTCCTAAAGAACCCTCCAAGAAAGGTAACTTGCGAATCAAGTTCAACATCAAGTTCCCGTCCAGGCTTACATCCGAGCAGAAAAACGGCATTAAGCGATTATTGACATCATATTCGTCTACATGA 1020 0.4549 MGVDYYKILDVDRNAKDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDILSDPQKRAVYDQYGEEGLKGQVPPPGGGSDSSSANFQFNPRSADDIFSEFFGFSSSFGGMGDMGGRAGASSFSRGGMFGDDIFSQFRSGAGEGSAHMPRKSAPIEIILQCSLEDLYKGTSKKMKISRDVIDANGKPTKVEEILTIEIKPGWKKGTKITFPAKGNEQRGHIPADLVFIIDEKPHSVFKRDGNDLVFTQKVSLVEALTGYTVQLTTLDGRNLTIPVNSIVSPSYEEVVKGEGMPIPKEPSKKGNLRIKFNIKFPSRLTSEQKNGIKRLLTSYSST 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02549 339 SUPERFAMILY Chaperone J-domain 3 117 IPR036869 -
Arst4g02549 339 PRINTS DnaJ domain signature 62 81 IPR001623 -
Arst4g02549 339 PRINTS DnaJ domain signature 24 39 IPR001623 -
Arst4g02549 339 PRINTS DnaJ domain signature 6 24 IPR001623 -
Arst4g02549 339 PRINTS DnaJ domain signature 42 62 IPR001623 -
Arst4g02549 339 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Arst4g02549 339 FunFam Dnaj homolog subfamily b member 156 237 - -
Arst4g02549 339 Pfam DnaJ domain 4 67 IPR001623 -
Arst4g02549 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 241 327 IPR008971 GO:0006457|GO:0051082
Arst4g02549 339 Pfam DnaJ C terminal domain 160 318 IPR002939 -
Arst4g02549 339 CDD DnaJ 4 59 IPR001623 -
Arst4g02549 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 160 239 IPR008971 GO:0006457|GO:0051082
Arst4g02549 339 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Arst4g02549 339 FunFam DnaJ subfamily B member 13 3 117 - -
Arst4g02549 339 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 333 - -
Arst4g02549 339 Gene3D - 239 319 - -
Arst4g02549 339 Gene3D DnaJ domain 3 120 IPR036869 -
Arst4g02549 339 Gene3D - 159 237 - -
Arst4g02549 339 FunFam DnaJ subfamily B member 13 239 319 - -
Arst4g02549 339 CDD DnaJ_C 158 321 - -
Arst4g02549 339 MobiDBLite consensus disorder prediction 72 91 - -
Arst4g02549 339 SMART dnaj_3 3 62 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02549 Arst-Chr4 92318226 92321508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02549 5 69 C2H2 Transcription Factor Family AT1G74250 34.783 3.66e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02549 K09510 - qsa:O6P43_016598 534.643