Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02548 ATGGCTGTCTCACTATGGAGAGCTCGCTTAGCTTCCTCTCTTGTCGCCAATCTCACCAACTCTCTTCGCCGTTTCTCTTCCGAAACAAATGCTCATAATGCTCGAGAGGCCATGATGAATCAGATGATGTATTCCGATATAAATTCTCGAATTGGGAGTTGTATGCCATTATCTTCTATGCGAATTGGAACTATCATTCACAATATTGAATTGAACCCGGGGCAAGGTGGCAAGCTGGTTAGAGCTGCTGGAACTTGTGCAAAAATCCTGAAAGAACCCACATCAAAATACTGTCTTATCCAGCTCCCCACGGGTGTTAAAAAAATGATTGATTCTCGTTGCAGGGCCACCGTTGGTACTGTCTCAAATCCAAGCCACGGAGATAAGAAGCTTAGGAAGGCTGGACAAAGCCGGTGGCTTGGCCGTAGACCAGTTGTTCGAGGAGTGGCCATGAATCCAGTAGACCATCCTCATGGTGGAGGAGAGGGTAAGAGCAAGAGTAGTGGTCGGTGGGGAAAAGGATCTCGAACTCCTTGGGGTAAGCCGACTAAGAGTGGATTCAAGACCGGGCCCCTGAAACGAAGGAAGTAG 591 0.4805 MAVSLWRARLASSLVANLTNSLRRFSSETNAHNAREAMMNQMMYSDINSRIGSCMPLSSMRIGTIIHNIELNPGQGGKLVRAAGTCAKILKEPTSKYCLIQLPTGVKKMIDSRCRATVGTVSNPSHGDKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGRWGKGSRTPWGKPTKSGFKTGPLKRRK 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02548 196 MobiDBLite consensus disorder prediction 150 196 - -
Arst4g02548 196 FunFam 50S ribosomal protein L2 122 196 - -
Arst4g02548 196 ProSitePatterns Ribosomal protein L2 signature. 144 155 IPR022671 GO:0003735|GO:0005840|GO:0006412
Arst4g02548 196 Gene3D - 40 121 IPR014722 -
Arst4g02548 196 SMART Ribosomal_L2_C_2 49 182 IPR022669 GO:0003735|GO:0005840|GO:0006412
Arst4g02548 196 PANTHER RIBOSOMAL PROTEIN L2 41 194 IPR002171 GO:0003735|GO:0005840|GO:0006412
Arst4g02548 196 Gene3D Ribosomal protein L2, domain 3 122 196 IPR014726 -
Arst4g02548 196 FunFam 60S ribosomal protein L2, mitochondrial 45 121 - -
Arst4g02548 196 Pfam Ribosomal Proteins L2, C-terminal domain 51 180 IPR022669 GO:0003735|GO:0005840|GO:0006412
Arst4g02548 196 SUPERFAMILY Translation proteins SH3-like domain 51 185 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02548 Arst-Chr4 92254501 92256561 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02548 24 161 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 40.136 4.07e-25 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02548 - - gmx:100792418 310.457