Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02535 GCCACTATTGATGATCACTCTCACTCTCACTCTCACTCTTCAATTCTCACCCTTACCAACCATGCCTCTTTTTCTATTGGCCGTGCTTTCTACCCTTCCAAGATCCCAACAAAATCTTCCTTTTCTTCCAACCCTTTACCGTTCTCAACCTCCTTCATCTTCTCCGTTGCACCATTCAAACACCTTCTCCCTGGCCATGGTTTTGTGTTCTTGTTCTCACCTTTTGAAGGAGCAAACGGGGTTAGCTCAGCTCAGCACCTTGGCCTCTTCAACTTGACCAACAATGGTAACCCCAAAAACTATGTTTTTGGGATTGAGTTTGATGTGTTCAAGAACCAAGAATTCAATGACATCAATGATAACCATGTGGGTTTGGATGTGAATTCTCTTACTTCTTTGGCCTCACACGATGCTGGATTTTGGGTCAGTGGAAAACATGATGAAAAGTTTAAGGAATTGAAGCTTAACAATGGTGAGAACTATCAAGTGTGGATTGAGTATTCAGATTCTAGAGTTAATGTAGCAATGGCTATTGCAGGGAAAAGAAGGCCTAATAGGCCTTTGATTAGTGAACTTGTGAATCTTTCTGATGTCTTTTTGGATGAAATGTTTGTGGGATTTTGTGGGGCAACAGAGCAACTTATTGAGAGTCACAAGATTTTGGCATGGAGCTTTAGCAACTCAAATTTTTCGATCGGCGATGGTTTGGTGACTACGAATTTGCCTTCATTTGGTTTTGTTTCAGGGATCAGTTTTGGAATTCTTATCTTTGTTATTGGTAGTGCAGCTATGGTGTTTGTTGTTTTGCTCAAAAGAAAAAGAAGCAAAAGAATGGAGGAAGAGGGAGATATTGAAGACTGGGAATTAGAGTATTGGCCACACCGTATTAGTTATGAAGACATTTATGCTGCAACTAAAGCATTTTCAGAACAGAATATAATTGAGTTTGGAGGTATGCTGAAGGATGTGGCTATGGGGGTATTGTATTTGCATGAGAGTTGGAAAGTTAAGGTGTTGCATAGGGACATAAAAGCAAGCAATGTATTACTTGAGAAGGATATGAATGCAAGGTTGGGGGATTTTGGACTCGCCCGGATGCATCATCATGAGCAGATACCTAACACCTCTCGAGTGATCGGAACGGTTGGCTACATGGCACCGGAACTGCTAAGAACCGGGAGAGCCTCGAGCAGCGGCCATGGCTTCCACCTTGCATTTTCATGA 1224 0.4208 ATIDDHSHSHSHSSILTLTNHASFSIGRAFYPSKIPTKSSFSSNPLPFSTSFIFSVAPFKHLLPGHGFVFLFSPFEGANGVSSAQHLGLFNLTNNGNPKNYVFGIEFDVFKNQEFNDINDNHVGLDVNSLTSLASHDAGFWVSGKHDEKFKELKLNNGENYQVWIEYSDSRVNVAMAIAGKRRPNRPLISELVNLSDVFLDEMFVGFCGATEQLIESHKILAWSFSNSNFSIGDGLVTTNLPSFGFVSGISFGILIFVIGSAAMVFVVLLKRKRSKRMEEEGDIEDWELEYWPHRISYEDIYAATKAFSEQNIIEFGGMLKDVAMGVLYLHESWKVKVLHRDIKASNVLLEKDMNARLGDFGLARMHHHEQIPNTSRVIGTVGYMAPELLRTGRASSSGHGFHLAFS 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02535 407 FunFam L-type lectin-domain containing receptor kinase V.9 1 235 - -
Arst4g02535 407 Pfam Protein kinase domain 297 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g02535 407 Pfam Legume lectin domain 10 229 IPR001220 GO:0030246
Arst4g02535 407 Gene3D Transferase(Phosphotransferase) domain 1 299 402 - -
Arst4g02535 407 ProSiteProfiles Protein kinase domain profile. 149 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g02535 407 PANTHER - 13 319 - -
Arst4g02535 407 SUPERFAMILY Protein kinase-like (PK-like) 318 394 IPR011009 -
Arst4g02535 407 CDD lectin_legume_LecRK_Arcelin_ConA 16 228 IPR001220 GO:0030246
Arst4g02535 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672|GO:0006468
Arst4g02535 407 Gene3D - 3 229 - -
Arst4g02535 407 Coils Coil 270 290 - -
Arst4g02535 407 SUPERFAMILY Concanavalin A-like lectins/glucanases 11 227 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02535 Arst-Chr4 92153294 92154689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02535 319 402 Receptor kinase-like Gene Family AT4G04960 65.476 7.85e-30 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Arst4g02535 Lectin_legB 1.7e-53 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02535 - - ahf:112795063 786.563