Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02532 ATGTCTAACACCAGCAACAATGTGGCTGGGGTTGACAACACCTTCAGAAGAAAATTCGATCGAGAAGAGTATTTGGAACGAGCTCGGGAGCGTGAGAGGCAGGAGGAGGAGGGTCGATCTAAATCTAAAGCTAAAGGTCCTCCAGTGCAGAGGAAACCCCTAAAACATAGAGATTATGAAGTGGACCTCGAGTCCCGCCTAGGCAAGACTCAAGTTGTTACGCCGGTTGCACCACTGAGTCAGCAGGCTGGATATTACTGCTCTGTTTGTGAGTGTGTGGTAAAGGACTCAGCGAACTACTTGGATCATATTAATGGAAAGAAACATCAAAGAGCTTTGGGCATGTCTATGCGAGTTGAACGAGCCTCTCTCCAACAGGTTCAGGAACGATTTGAGGTTCTTAAGAAACGTAAAGATCTTGGCACATTCACTGAGCAAGATCTTGACGAAAGGGTCCTAAAACAGCAGCAAGAAGAGGAAGAAAGAAAACGATTGCGTCGTGAAAAGAAGAAGGAAAAGAAAGAGAAGGCAGTGGAAGAACCGGAAATTGATCCTGATGTTGCGGCCATGATGGGGTTTGGTGGTTTCCGGTCATCAAAGAAATGA 606 0.462 MSNTSNNVAGVDNTFRRKFDREEYLERARERERQEEEGRSKSKAKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLQQVQERFEVLKKRKDLGTFTEQDLDERVLKQQQEEEERKRLRREKKKEKKEKAVEEPEIDPDVAAMMGFGGFRSSKK 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02532 201 Pfam Zinc-finger of C2H2 type 85 109 - -
Arst4g02532 201 MobiDBLite consensus disorder prediction 155 183 - -
Arst4g02532 201 MobiDBLite consensus disorder prediction 20 44 - -
Arst4g02532 201 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 4 201 IPR040107 GO:0000398|GO:0005681
Arst4g02532 201 SUPERFAMILY beta-beta-alpha zinc fingers 80 122 IPR036236 -
Arst4g02532 201 Coils Coil 148 180 - -
Arst4g02532 201 SMART ZnF_U1_5 82 116 IPR003604 GO:0003676|GO:0008270
Arst4g02532 201 MobiDBLite consensus disorder prediction 20 56 - -
Arst4g02532 201 MobiDBLite consensus disorder prediction 155 201 - -
Arst4g02532 201 Gene3D Classic Zinc Finger 79 117 - -
Arst4g02532 201 FunFam zinc finger matrin-type protein 2-like 79 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02532 Arst-Chr4 92066563 92068991 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02532 4 147 C2H2 Transcription Factor Family AT3G05760 82.639 3.01e-86 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst4g02532 zf-C2H2_jaz 1.8e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02532 K12848 - ahf:112727672 318.546