Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02517 ATGGTAGGTCCAGAGGTTGATGCAAATGGGAATGGCTCATTGAAGTTGAAGCCAAGTGAGAGCAGAGGAAAGAACATCCAATGCAGAGCTGCGGTGGCTTATGGTCCTGGAGAACCCTTTGTGGTGGAACAAGTTATTGTTCATCCTCCTCAGAAAATGGAGGTTCGGATCAAGATCCTCTACACTTCAATATGTCATACCGATCTAGCATGTTGGAAAGCTGAGAATGAAGCTCAGCGCGCTTTTCCTCGGATTTTTGGCCATGAAGCTTCCGGGGTTGTGGAGAGTGTGGGAGAAGGAGTAACAGACATAAGAGAAGGGGACATAGTGGTGCCAATATTCAACGGAGAATGTGGAGAATGCTGTTACTGCAAGAGTTCCGTAACAAACATGTGTGAGAGGTTTGGCGTGAACCCAATGAAGAAGGTTATGGAAAGTGATGGAAAAAGCAGGTTCACAACGGTTCAAGGAAAACCGATTTACCATTTCTTGAACACATCAACTTTTGCTGAGTACACCGTCGTTGACTCTGCTTGTGTGGTCAACATCAACCCTCAACTCGCTCCAAACCTCAAACAACTTACCCTCATCAGTTGCGGTGTCTCCACCGGAGTTGGAGCTGCTTGGAACAGTGCAAATGTGCATGCTGACTCCACTGTTGCAGTTTTTGGCTTAGGTGCTGTGGGGCTTGCAGTTGCAGAAGGGGCACGAGCTAGGGGTGCATCAAAAATAATAGGTGTGGACATTAATCCAGACAAATTCATCAAAGCCCAAGCTATGGGAGTCACAGATTTCATAAATCCAAGAGATGAAGAGAAACCAGTGAATGAGAGAATCAAGGAAATGACCGGAGGAGGTGTAGATTACAGTTTTGAATGTGCTGGCAACTTGGACGTTCTAAGGGAAGCCTTCTTGTCTGCTCATGAGGGTTGGGGATTGACTGTAGTACTAGGAATTCACTCAAAACCAGAATTGCTTCCAATTCACCCAATGGAGCTGTTCAATGGTCGCAGAATGATAGGATCAGTTTTTGGAGGTTTCAAAGGGAAAACCCAGTTGCCTCATTTTGCCAATGAATGCATGCATGGAGTGGTAAATCTAGACAAGTTCATCACACACGAGCTTCCATTTGATGAGATTAACAAAGCCTTTGATCTTCTGATTGCTGGAAAATCACTGAGATGTATCCTACACCTCTAA 1200 0.4525 MVGPEVDANGNGSLKLKPSESRGKNIQCRAAVAYGPGEPFVVEQVIVHPPQKMEVRIKILYTSICHTDLACWKAENEAQRAFPRIFGHEASGVVESVGEGVTDIREGDIVVPIFNGECGECCYCKSSVTNMCERFGVNPMKKVMESDGKSRFTTVQGKPIYHFLNTSTFAEYTVVDSACVVNINPQLAPNLKQLTLISCGVSTGVGAAWNSANVHADSTVAVFGLGAVGLAVAEGARARGASKIIGVDINPDKFIKAQAMGVTDFINPRDEEKPVNERIKEMTGGGVDYSFECAGNLDVLREAFLSAHEGWGLTVVLGIHSKPELLPIHPMELFNGRRMIGSVFGGFKGKTQLPHFANECMHGVVNLDKFITHELPFDEINKAFDLLIAGKSLRCILHL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02517 399 SUPERFAMILY GroES-like 22 218 IPR011032 -
Arst4g02517 399 PANTHER ALCOHOL DEHYDROGENASE 23 397 - -
Arst4g02517 399 Gene3D - 204 342 - -
Arst4g02517 399 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 87 101 IPR002328 GO:0008270|GO:0016491
Arst4g02517 399 Pfam Zinc-binding dehydrogenase 227 347 IPR013149 -
Arst4g02517 399 MobiDBLite consensus disorder prediction 1 21 - -
Arst4g02517 399 FunFam S-(hydroxymethyl)glutathione dehydrogenase 204 342 - -
Arst4g02517 399 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 192 363 IPR036291 -
Arst4g02517 399 FunFam Alcohol dehydrogenase 6 31 217 - -
Arst4g02517 399 CDD alcohol_DH_plants 26 398 - -
Arst4g02517 399 Pfam Alcohol dehydrogenase GroES-like domain 54 182 IPR013154 -
Arst4g02517 399 Gene3D - 31 394 - -
Arst4g02517 399 SUPERFAMILY GroES-like 349 398 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02517 Arst-Chr4 91625518 91636699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02517 54 388 Monolignol Biosynthesis Gene Families AT2G21890 27.826 1.73e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02517 K00001 - gmx:100787307 605.134