Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02514 ATGGGGTTTAGTTTCAAGAGAAGGAAGAAGGAGCAAGATGGAGGGGGTGGAGATATCACTAGGTCTTTCAAGGATTCACTTAAAGCTCTTGAAGCTGACATCCAATTTGCCAATACACTAGCTTCTGGGTATCCATGCGAGCACGATGGTTCTCGCTTCCAAATGAGGTTATCATACAGCCCAGCTGCTCAATTTTTCCTTTTTATGGTTCAATGGACCGATTGTCACCTTGCCGGAGCACTGGGATTGCTTAGAATTCTTATATACAAGGCATGTGCTGATGGTAAGACAACCATTTCGATTTATGAACGAAAAGCGAGCCTGAAGGAGTTCTACCGTGTGCTGTTTCCCTCTTTGTTGCAACTCAACGGAGGAATCAGTGATGTTGAAGACAGGAAACAAAAACATTTGTGTGCTACTAAGTACAAGACAAGAGACATGACAAGCAAGGGAAAGGTCTCTGAAATCGAGATAGAGAGAGAAGAAGAATGTGGCATTTGCCTGGAGATGAATGGCACGGTTGTGTTACCGAATTGCAATCACTCGATGTGTATGAAATGCTACGAAGATTGGTGGGGAAGATCTCAATCTTGCCCTTTCTGTAGAGAAAGTCTTGAAGGAGTAAAGTCTGGTGACCTTTGGATCTACATAAACAAGAGTGAAATTGATGATTTGGCTTCAATCACCAAAGAGAATTTGAAGAGATTATTTATGTACATACAAAGATTGCCCATCATTATGCCAGACCCCCCTATATCGGTTTCATACCATCATCGCTGGTGA 783 0.4253 MGFSFKRRKKEQDGGGGDITRSFKDSLKALEADIQFANTLASGYPCEHDGSRFQMRLSYSPAAQFFLFMVQWTDCHLAGALGLLRILIYKACADGKTTISIYERKASLKEFYRVLFPSLLQLNGGISDVEDRKQKHLCATKYKTRDMTSKGKVSEIEIEREEECGICLEMNGTVVLPNCNHSMCMKCYEDWWGRSQSCPFCRESLEGVKSGDLWIYINKSEIDDLASITKENLKRLFMYIQRLPIIMPDPPISVSYHHRW 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02514 260 SUPERFAMILY RING/U-box 153 205 - -
Arst4g02514 260 ProSiteProfiles Zinc finger RING-type profile. 164 202 IPR001841 -
Arst4g02514 260 MobiDBLite consensus disorder prediction 1 20 - -
Arst4g02514 260 PANTHER RING FINGER PROTEIN 41, 151 21 256 - -
Arst4g02514 260 SMART ring_2 164 201 IPR001841 -
Arst4g02514 260 ProSitePatterns Zinc finger RING-type signature. 179 188 IPR017907 -
Arst4g02514 260 FunFam RING/U-box superfamily protein 145 211 - -
Arst4g02514 260 Pfam Zinc finger, C3HC4 type (RING finger) 161 207 - -
Arst4g02514 260 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 154 211 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02514 Arst-Chr4 91414841 91418524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02514 108 213 C3H Transcription Factor Family AT5G01960 31.532 5.02e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02514 K25840 - gmx:100814293 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g02514 4 91414841 91418524 Arst4g02514 4 91414841 91418524 ECH
Arst4g02514 4 91414841 91418524 Arst2g02539 2 80733907 80737125 PCT