LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst4g02509	ATGGGATCAAGCAGCTTTCTGTGGAATTTTACCAAAAAGTTTGTCACATTTGGGATCATTACTGTTACTGTATCTGATCGTTATGTAACAGTGGTTCCAGTTCGGGGTGGCTCTATGTCTCCCACACTTAATCCAAAAACCAGCTCTTCTGCAGGAAACTTCTCTGATGATTATGTCTTGGTTGAGAAGTTTTGCGTTGACAAATACAGATTTTCACATGGAGATGTTGTGGTCTTCAGCTCTCCATTGAATCACAAGGAGAGACACATAAAGAGAATAGTTGCATTATCTGGTGAATGGTTTGGTAGTCGTCAGAACTATGATGTGTTGAAGGTTCCAGAAGGACATTGTTGGGTTGAAGGAGATAATGCGGCTTTTAGCATGGATTCAAAGTCATTTGGACCTGTAAGGTTCTCTTATCACTTAGTTTAA	432	0.4005	MGSSSFLWNFTKKFVTFGIITVTVSDRYVTVVPVRGGSMSPTLNPKTSSSAGNFSDDYVLVEKFCVDKYRFSHGDVVVFSSPLNHKERHIKRIVALSGEWFGSRQNYDVLKVPEGHCWVEGDNAAFSMDSKSFGPVRFSYHLV	143

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst4g02509	143	PANTHER	MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2	1	137	IPR037730	GO:0006465\|GO:0006627\|GO:0008236\|GO:0042720
	Arst4g02509	143	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	112	131	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Arst4g02509	143	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	27	43	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Arst4g02509	143	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	89	101	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Arst4g02509	143	SUPERFAMILY	LexA/Signal peptidase	29	138	IPR036286	-
	Arst4g02509	143	Pfam	Signal peptidase, peptidase S26	8	99	IPR019533	GO:0004252\|GO:0006465
	Arst4g02509	143	CDD	S26_SPase_I	31	136	IPR019533	GO:0004252\|GO:0006465
	Arst4g02509	143	Gene3D	Umud Fragment, subunit A	26	142	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst4g02509	Arst-Chr4	91282496	91288938	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst4g02509	39	138	MADS-box Gene Family	AT1G29960	33.019	3.49e-11	55.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst4g02509	K09648		-	qsa:O6P43_016615	224.557