Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02508 ATGGGATCAAGCAGCTTTCTGTGGAATTTTACCAAAAAGTTTGTCACATTTGGGATCATTACTGTTACTGTATCTGATCGTTATGTAACAGTGGTTCCAGTTCGGGGTGGCTCTATGTCTCCCACACTTAATCCAAAAACCAGCTCTTCTGCAGGAAACTTCTCTGATGATTATGTCTTGGTTGAGAAGTTTTGCGTTGACAAATACAGATTTTCACATGGAGATGTTGTGGTCTTCAGCTCTCCATTGAATCACAAGGAGAGACACATAAAGAGAATAGTTGCATTATCTGGTGAATGGTTTGGTAGTCGTCAGAACTATGATGTGTTGAAGGTTCCAGAAGGACATTGTTGGGTTGAAGGAGATAATGCGGCTTTTAGCATGGATTCAAAGTCATTTGGACCTATTCCCTTGGGCCTCATACGAGGAAGGGTGACCCATGTTGTGTGGCCTCCACAAAGAATAGGCGCCATCCAGAGTCCTCCACGAGAAAGATTATCTTCTTTATAG 510 0.4255 MGSSSFLWNFTKKFVTFGIITVTVSDRYVTVVPVRGGSMSPTLNPKTSSSAGNFSDDYVLVEKFCVDKYRFSHGDVVVFSSPLNHKERHIKRIVALSGEWFGSRQNYDVLKVPEGHCWVEGDNAAFSMDSKSFGPIPLGLIRGRVTHVVWPPQRIGAIQSPPRERLSSL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02508 169 CDD S26_SPase_I 31 145 IPR019533 GO:0004252|GO:0006465
Arst4g02508 169 PRINTS Bacterial leader peptidase 1 (S26A) family signature 27 43 IPR000223 GO:0006508|GO:0008236|GO:0016020
Arst4g02508 169 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Arst4g02508 169 PRINTS Bacterial leader peptidase 1 (S26A) family signature 112 131 IPR000223 GO:0006508|GO:0008236|GO:0016020
Arst4g02508 169 Pfam Signal peptidase, peptidase S26 105 150 IPR019533 GO:0004252|GO:0006465
Arst4g02508 169 Pfam Signal peptidase, peptidase S26 8 99 IPR019533 GO:0004252|GO:0006465
Arst4g02508 169 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 1 160 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Arst4g02508 169 FunFam Mitochondrial inner membrane protease subunit 25 162 - -
Arst4g02508 169 Gene3D Umud Fragment, subunit A 26 161 - -
Arst4g02508 169 SUPERFAMILY LexA/Signal peptidase 29 158 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02508 Arst-Chr4 91282496 91288938 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02508 39 162 MADS-box Gene Family AT1G29960 36.154 1.17e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02508 K09648 - qsa:O6P43_016615 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g02508 4 91282496 91288938 Arst4g02508 4 91282496 91288938 ECH