Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02480 ATGAGTGCAAGCACAACCCGCGGCGGCGGCGGCGGCAGCGGCGGCGGTAGCAGCAGTGGCGCTAGTGGGAGTGGTACCAAAGGTAGGGGTAGTGGCAGTGGCGGTCCTTGCGGCGCTTGCAAGTTTCTGAGGAGGAAATGTGCTCCGGGATGCGTCTTTGCGCCGTACTTTGATCCAGATCAAGGTGCAACCTACTTTGCGTCGGTGCACAAGGTTTTTGGGGCTAGCAACGTTGGTAAGCTTCTTTCGAAAATTCCAGTTCATAAGAGGCTTGATGCTGTTATTACTATTTGTTATGAAGCACAAGCACGAATGAGAGATCCTGTTTATGGATGTGTTGGTCAAATCTTTACCCTTCAACAACAGGTGTTGGCTTTAAAAGCCGAACTCTCATTCTTACAAAATCATCTTGCTACAATGGAGATACGCCAACCGCCACCAATTCCTCCAACGCAAGGAGTGCCGACATCAACTATTTTCTCAGTTGCGGACTTACCAATGGTTGTGGGCGTTGCCTCCGCCACCTTATCAATGCCGGCCACCTTTGATCCATCTTCCCACTTTGATCTAGCAACGGCCCAAGCTTCTTGGGCTGTGTATCAACGGGCCATGATGGACCCACGCCAATACATGGCTGTTGCCAACCCAATAGGCCCAACTGCAGGTGGTGGTGTTGATCTCCAAACAGTTGCACGTGAGCTCATCAATAGGCATGTGCCTCCACAAGCACCACCTCAGACTTTTGGTTCCAATGCTGCATCGACGTCAGCTCCATCGCTTAGTTCTTCTAAGTGA 795 0.5132 MSASTTRGGGGGSGGGSSSGASGSGTKGRGSGSGGPCGACKFLRRKCAPGCVFAPYFDPDQGATYFASVHKVFGASNVGKLLSKIPVHKRLDAVITICYEAQARMRDPVYGCVGQIFTLQQQVLALKAELSFLQNHLATMEIRQPPPIPPTQGVPTSTIFSVADLPMVVGVASATLSMPATFDPSSHFDLATAQASWAVYQRAMMDPRQYMAVANPIGPTAGGGVDLQTVARELINRHVPPQAPPQTFGSNAASTSAPSLSSSK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02480 264 MobiDBLite consensus disorder prediction 1 33 - -
Arst4g02480 264 ProSiteProfiles LOB domain profile. 35 137 IPR004883 -
Arst4g02480 264 Pfam Lateral organ boundaries (LOB) domain 36 134 IPR004883 -
Arst4g02480 264 MobiDBLite consensus disorder prediction 1 29 - -
Arst4g02480 264 PANTHER LOB DOMAIN CONTAINING PROTEIN 32 144 - -
Arst4g02480 264 MobiDBLite consensus disorder prediction 243 264 - -
Arst4g02480 264 MobiDBLite consensus disorder prediction 239 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02480 Arst-Chr4 90098276 90110276 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02480 39 264 AS2 family AT2G45420 49.351 2.58e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst4g02480 LOB 1.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02480 K21994 - twl:119982189 251.521