Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02470 ATGAATTTGGCCATAAGGCATATAACCATGATTAAAAATTGCTTTGGTGCTTTGAATTGGTGTAGAGGGAGAGATGATAGTGATACTGCTGAGAAGCCACAGGAACAAGTCATTGCAACCAAACAATTTACCTATAACTCGTTGCGATCGGCAACCAGAGATTTTCACCCTTCAAGCAAACTTGGTGGAGGAGGTTATGGAGTTGTCCACAAGGGAGTTTTAAGAGATGGTACTCCAGTCGCTATCAAGTCTCTTTCTGTTGAGTCTAAACAAGGAACCCGTGAATTTATGACTGAAATTGATATGATATCGAATATACGGCATCCAAATCTTGTCGGACTAGTTGGCTGCTGTGTCGAGGGTAGTCATCGAATATTGGTGTATGAATTTCTGGAGAACAATAGCCTTGCAAGTTCTTTGCTTGGTTCTAAAAGTAAATATGTTGCTCTGGATTGGCCGAAGAGGGCTGCTATTTGCCGCGGTACAGCTTCTGGTTTGGTGTTCCTCCATGATGAGGCTCAGCCAAACATTGTTCACAGAGATATCAAGGCCAGCAACATCCTTCTGGACGAGAACTTCAGCCCGAAAATTGGAGATTTTGGTCTTGCGAAACTTTTTCCTGATAATGTCACCCATGTTAGCACTCGAGTTGCAGGAACGGTGGGATACCTGGCACCGGAATATGCACTTCTAGGACAGCTTACAAAGAAAGCAGATGTATATAGTTTTGGGGTTCTCATGCTTGAAATAATCAGTGGTAAAAGTAGCAGCAAAGCTGCATTTGGAGACAATCTCCTGGTTCTGGTGGAGTGGGCTTGGAAGCTCAAGGAGGAAAATAGGCTTCTGGACATGGTCGATCCGGAACTAGCCGAATTCGATGAGATGGAGGTTTTCCGGTTCATTAAGGTTGCTCTATTTTGCACTCAGGCTGCCGCTCAGAATCGGCCTAACATGAAGCAAGTGATGGAAATGCTCTCAAAGGAAGTTCATATTAACGAGAAGGCGTTGACTGAGCCTGGAATATACAGATGGCATAGCTCTGGTAAGATGGGTGGTTCTTTGAATGAGACACCATCTTCTCAACTATTCAAGAACAAAAAAACCGGAATGCCGCATGAAAACTCAACCAACTTTAGCAGTAACGACGTCGTGACAGAGATGCTCCCCAGATAA 1173 0.4408 MNLAIRHITMIKNCFGALNWCRGRDDSDTAEKPQEQVIATKQFTYNSLRSATRDFHPSSKLGGGGYGVVHKGVLRDGTPVAIKSLSVESKQGTREFMTEIDMISNIRHPNLVGLVGCCVEGSHRILVYEFLENNSLASSLLGSKSKYVALDWPKRAAICRGTASGLVFLHDEAQPNIVHRDIKASNILLDENFSPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLMLEIISGKSSSKAAFGDNLLVLVEWAWKLKEENRLLDMVDPELAEFDEMEVFRFIKVALFCTQAAAQNRPNMKQVMEMLSKEVHINEKALTEPGIYRWHSSGKMGGSLNETPSSQLFKNKKTGMPHENSTNFSSNDVVTEMLPR 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02470 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Arst4g02470 390 ProSitePatterns Protein kinases ATP-binding region signature. 61 83 IPR017441 GO:0005524
Arst4g02470 390 SMART serkin_6 55 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g02470 390 Gene3D Phosphorylase Kinase; domain 1 21 130 - -
Arst4g02470 390 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 28 130 - -
Arst4g02470 390 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 40 355 - -
Arst4g02470 390 FunFam Putative LRR receptor-like serine/threonine-protein kinase 131 337 - -
Arst4g02470 390 CDD STKc_IRAK 61 327 - -
Arst4g02470 390 ProSiteProfiles Protein kinase domain profile. 55 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g02470 390 MobiDBLite consensus disorder prediction 367 384 - -
Arst4g02470 390 Gene3D Transferase(Phosphotransferase) domain 1 131 339 - -
Arst4g02470 390 SUPERFAMILY Protein kinase-like (PK-like) 34 325 IPR011009 -
Arst4g02470 390 Pfam Protein tyrosine and serine/threonine kinase 58 325 IPR001245 GO:0004672|GO:0006468
Arst4g02470 390 MobiDBLite consensus disorder prediction 367 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02470 Arst-Chr4 89410183 89413990 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02470 43 340 Receptor kinase-like Gene Family AT1G56120 53.691 7.38e-106 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst4g02470 PK_Tyr_Ser-Thr 3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02470 - - gmx:100816683 611.298