Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02403 ATGCTTCAGATTCGGCTTAGTAAGGCTCCTGCCTCAGAAGGGTCGGCAGGGGTTAAGCCCCCACCTGTTGAGACTGTTACCGTCGCTTGCCCTGACCATCTGGTTCTTGCTGATCTACCTGTTGCAAAGGGCATTGGATCAGCTACTGCTGCTTCGCTTGTCAAGACGTTGGGCCGTAGATCACGCCGCCAGCTCGGTGAGCGGGTCCATTTCTGCGTTCGCTGTGATTTTCCAATTGCTATATATGGACGACTGAGCCCTTGTGAGCATGCATTTTGTCTCGATTGTGCTAGAAGTGATTCAATGTGCTACCTGTGTGATGAACGAATCCAAAAGATTCAGACAATCAAAATGATGGAAGGAATCCTCATATGTGCAGCTCCTCATTGTCTCAAGTCTTTCTTGAAGAAGGCTGAATTTGAGTCTCATATCCAAGACAGCCACTCTAACCTCCTTCGACCAAATGCAGATAAAGAAGATGGAAATGAGTCCGAGGTACAGAGTGTTAGGCAATCTACGGCTTCAGATGCTCGAGGTCCACAAAGGCCAGTTTTCTCTCCTGGATCAAATTCGCAGCAGCATGATCCAGAAGACAAAACACGTCGACAGCCACCAAGAGATCAACCACCTTCAAGGGGAAATCTGCAGCCAAAGCCACCATTTTTTGGTCAACAAAATCACCCTTCTGACCCCATGCCAAGCTCTGGTTTAGGGATTCAACAGAGCTTCCATCAACAAAGTTTTGACATGCCACATCCCACCCAAGAACCTTCCCTGTTTGGTGACAGGCAGCAATCAATTGGTCCAGAGACCTCATTTCCTGAGTATCCACCAATGCATTCTGGTCCCAATATGCCTACAATGGTTGCTTCAAACCCAATGATGAACCCTCCTATGCCATTTGGTTATCCCCCTTACCCACAGGATCGTGCTCAACCGTTTTATGGTGCTCCCTATGATATACCTAGGCAGGATTCGGCATCTGATATGGGTGGAGACCAGAGTTCGTTACTGGGTTTCCCACAAGGGGTCCCAGGTGGCCCAAATTTCCCTGGAAATTATCCCCAGCCCTGGCATGCAGGAATTGGTGGTGTGCCTTTTGAACAAGGACCGGGTGGTATGGTTGTGGATCCAAGGGATGCCAAAGGCGTATTGGCACCACAGCCCATGAGCCTCCCGCCGCCACCACCGCCTCCACCCCACATGTCACACATGAAGCAGAATTACTATCCTGGTGATGTTGGGCATGAAGGTCAGGGTTATGGATGGCAACATGATAGTCGTGATAGCTTTGGTGGCCAAGGCTAG 1308 0.4977 MLQIRLSKAPASEGSAGVKPPPVETVTVACPDHLVLADLPVAKGIGSATAASLVKTLGRRSRRQLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSMCYLCDERIQKIQTIKMMEGILICAAPHCLKSFLKKAEFESHIQDSHSNLLRPNADKEDGNESEVQSVRQSTASDARGPQRPVFSPGSNSQQHDPEDKTRRQPPRDQPPSRGNLQPKPPFFGQQNHPSDPMPSSGLGIQQSFHQQSFDMPHPTQEPSLFGDRQQSIGPETSFPEYPPMHSGPNMPTMVASNPMMNPPMPFGYPPYPQDRAQPFYGAPYDIPRQDSASDMGGDQSSLLGFPQGVPGGPNFPGNYPQPWHAGIGGVPFEQGPGGMVVDPRDAKGVLAPQPMSLPPPPPPPPHMSHMKQNYYPGDVGHEGQGYGWQHDSRDSFGGQG 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02403 435 MobiDBLite consensus disorder prediction 383 435 - -
Arst4g02403 435 MobiDBLite consensus disorder prediction 146 165 - -
Arst4g02403 435 MobiDBLite consensus disorder prediction 218 271 - -
Arst4g02403 435 CDD RING-HC_HAKAI-like 70 119 IPR040380 -
Arst4g02403 435 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 425 IPR040383 GO:0016567|GO:0061630
Arst4g02403 435 FunFam E3 ubiquitin-protein ligase Hakai 69 123 - -
Arst4g02403 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 120 IPR013083 -
Arst4g02403 435 MobiDBLite consensus disorder prediction 166 193 - -
Arst4g02403 435 ProSitePatterns Zinc finger C2H2 type domain signature. 125 148 IPR013087 -
Arst4g02403 435 ProSitePatterns Zinc finger RING-type signature. 88 97 IPR017907 -
Arst4g02403 435 MobiDBLite consensus disorder prediction 388 404 - -
Arst4g02403 435 MobiDBLite consensus disorder prediction 146 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02403 Arst-Chr4 85606551 85610951 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02403 1 432 C2H2 Transcription Factor Family AT5G01160 43.764 1.93e-106 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02403 K15685 - gmx:100817582 722.235