Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02358 ATGCAGGAAGGTAAAGCCGTGGTAGTGGGAATTGTAACCGATGATATCAGAATGTATGAAGTTCTTGCATTGAAAGTTACTGCACCCAGGTTTATAGAGACTGCACATGCTAGAATAGAGATGGCTGGTGATGAATGCTTGACATTTGATCAGCTTGCACTTAGGGCACCTCTCGGACAGAACACGGTTCTTTTTAGAGGCCCAAAGAACTCCAGGAAAGCTGTAAAATACTTTGGTCCTGCTCTTGGTGTTCCTCACAGCCATACCAAGCCTTATGTACGATCTAAGAAAAGGAAGTTTGAGAGGGCTAGAGGAAGGAAGAACAGCAAAAAACTTAGGATTTATGTTGTATTGTTTCTTTATTTTTCTTTAGTTTTTAGTTTTGGAATTTAA 393 0.402 MQEGKAVVVGIVTDDIRMYEVLALKVTAPRFIETAHARIEMAGDECLTFDQLALRAPLGQNTVLFRGPKNSRKAVKYFGPALGVPHSHTKPYVRSKKRKFERARGRKNSKKLRIYVVLFLYFSLVFSFGI 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02358 130 PANTHER 60S RIBOSOMAL PROTEIN L18 6 113 IPR000039 GO:0003735|GO:0005840|GO:0006412
Arst4g02358 130 Pfam Ribosomal protein 60S L18 and 50S L18e 5 113 IPR021131 -
Arst4g02358 130 Gene3D - 1 113 - -
Arst4g02358 130 SUPERFAMILY Ribosomal proteins L15p and L18e 6 66 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02358 Arst-Chr4 83261358 83264613 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02358 6 114 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 71.560 8.07e-56 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02358 K02883 - adu:127746501 255.758