LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst4g02250	ATGGCTCAGGATGATGTGAAACTCTTGGGGGTTGTGGGAAGCCCGTTTGTTTGCAGGGTTCAGATTGCTCTAAAATTGAAGGGAGTTGAATACAAATTTGTAACACAAGATTTGCAGAACAAGAGTGAAGAACTCCTAAAATACAACCCAATTCACAAGAAGGTGCCAGTGCTTGTTCACAATGAAAGGCCCATAAATGAGTCCCTTGTGATTGTTGAGTACATCGATGAAGCTTGGAAGGGCAAATCCATTTTGCCCACTGATCCTTACCAGAGAGCCCTGGCACGTTTCTGGGCCAAGTTCATAGATGACAAGGTGTTTGGTGCGGCATGGAAATCTGTTTTCACCGTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTGAGAAGAACGTTAAAGAAACACACGAGGCTCTTCAATTTCTTGAAGATGAGCTTAAAGGCAAGTTCTTTGGAGGAGAGGAATTTGGCCTTGTGGACATTGCCGCTGTATACATTGCGTTTTGGGTGCCTCTGATTCAAGAAATTGCAGGTCTTCAACTGTTCACTAATGAGAAGTTTCCCAAACTCTACAAATGGAGTCAAGAATTTCTGAGTCAACCAACTATCAAAGAGTGTTTGCCTCCTAGAGACCCAATTTTGGCCTTCTTCAAAGGTCGCTATGAAAGCCTTCTTGCTTCAGCAAAATAG	705	0.4057	MAQDDVKLLGVVGSPFVCRVQIALKLKGVEYKFVTQDLQNKSEELLKYNPIHKKVPVLVHNERPINESLVIVEYIDEAWKGKSILPTDPYQRALARFWAKFIDDKVFGAAWKSVFTVXXXXXXXXXXXXXXXREKNVKETHEALQFLEDELKGKFFGGEEFGLVDIAAVYIAFWVPLIQEIAGLQLFTNEKFPKLYKWSQEFLSQPTIKECLPPRDPILAFFKGRYESLLASAK	234

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst4g02250	234	Gene3D	Glutaredoxin	1	87	-	-
	Arst4g02250	234	Gene3D	-	88	233	-	-
	Arst4g02250	234	SFLD	Main (cytGST)	2	232	-	-
	Arst4g02250	234	SFLD	Main.3: Omega- and Tau-like	2	232	IPR045073	-
	Arst4g02250	234	SFLD	Main (cytGST)	2	232	-	-
	Arst4g02250	234	SFLD	Main.3: Omega- and Tau-like	2	232	IPR045073	-
	Arst4g02250	234	Pfam	Glutathione S-transferase, N-terminal domain	6	77	IPR004045	-
	Arst4g02250	234	FunFam	Tau class glutathione S-transferase	1	87	-	-
	Arst4g02250	234	ProSiteProfiles	Soluble glutathione S-transferase C-terminal domain profile.	88	221	IPR010987	-
	Arst4g02250	234	SUPERFAMILY	Thioredoxin-like	5	106	IPR036249	-
	Arst4g02250	234	SUPERFAMILY	GST C-terminal domain-like	77	227	IPR036282	-
	Arst4g02250	234	PANTHER	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	8	217	IPR045073	-
	Arst4g02250	234	CDD	GST_C_Tau	89	225	IPR045074	GO:0004364\|GO:0006749
	Arst4g02250	234	CDD	GST_N_Tau	6	79	-	-
	Arst4g02250	234	Pfam	Glutathione S-transferase, C-terminal domain	132	206	IPR004046	-
	Arst4g02250	234	FunFam	Tau class glutathione S-transferase	85	232	-	-
	Arst4g02250	234	Coils	Coil	133	150	-	-
	Arst4g02250	234	ProSiteProfiles	Soluble glutathione S-transferase N-terminal domain profile.	4	83	IPR004045	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst4g02250	Arst-Chr4	76022781	76024044	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst4g02250	3	232	Glutathione S-transferase Gene Family	AT3G09270	49.356	2.23e-73	221

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst4g02250	K00799		-	gmx:100500680	340.117