Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02162 ATGAACGGGAAAGCCTCAATCTCCAAGGAGCTTAATGCCAAGCATACCAAGATCTTAGAAGGACTTATGAAGCTACAAGAAAATAGGGAATGTGCAGACTGCCGGAACAAGGCACCACGATGGGCGAGTGTGAACCTAGGGATATTTATTTGCATGCAATGTTCCGGGATACACCGAGGTCTTGGAGTGCATATATCCAAGGTGCGATCTACAACCTTGGATACATGGTTGCCCGATCAAGTTTCTTTCATGCAATTTATGGGTAATGAAAAATCAAATAAGGATTGGGAGGCAAAGCTGCCCCCCAATTTCGACAGAGGCACAATGGGAATTGAGAAATTTATTTATTCCAAGTATGTGGAGAAAAAGTGGGCTTCAAAAGAAGGATTAATTAGTGGAGCTACAAATTATTTCCCGAAGAACATTAGTAGGAAACTTTCTTTAGAAGAAAGCATTCTTTCCAAACACGTGGCACAAGTTCTGCCTCCATTGACACGAGCTCATGGTGGGGGTTCCTTAGTTGTGCAAAAGAAGAGTTCAGCTCCACCGTTAATTAAGAGGGCATCTTCATCAGTTGATTTTGATAAGTTTATAGGAAAGAGCAATGGCAGTTCTGACCTTTTCGCCTTGCTTTCTGTCCAAGAAGATAAACAAGGTTTCTCAAGTTGGGCAACATTTGATTGA 684 0.4196 MNGKASISKELNAKHTKILEGLMKLQENRECADCRNKAPRWASVNLGIFICMQCSGIHRGLGVHISKVRSTTLDTWLPDQVSFMQFMGNEKSNKDWEAKLPPNFDRGTMGIEKFIYSKYVEKKWASKEGLISGATNYFPKNISRKLSLEESILSKHVAQVLPPLTRAHGGGSLVVQKKSSAPPLIKRASSSVDFDKFIGKSNGSSDLFALLSVQEDKQGFSSWATFD 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02162 227 SMART arf_gap_3 13 132 IPR001164 GO:0005096
Arst4g02162 227 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 130 IPR044520 GO:0005096
Arst4g02162 227 FunFam stromal membrane-associated protein 1 isoform X1 1 130 - -
Arst4g02162 227 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 132 IPR001164 GO:0005096
Arst4g02162 227 Pfam Putative GTPase activating protein for Arf 17 127 IPR001164 GO:0005096
Arst4g02162 227 SUPERFAMILY ArfGap/RecO-like zinc finger 15 126 IPR037278 -
Arst4g02162 227 CDD ArfGap 19 119 - -
Arst4g02162 227 Gene3D Arf GTPase activating protein 2 130 IPR038508 -
Arst4g02162 227 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Arst4g02162 227 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Arst4g02162 227 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02162 Arst-Chr4 69102018 69120274 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02162 19 147 C2H2 Transcription Factor Family AT4G21160 38.406 3.97e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02162 K12486 - gmx:100803735 333.569