Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02152 ATGCTTGAGTTGAAAACAGAAGCGTGCTGTCTGGAGAATAAGCAATCCACTGCTGCTTCTTGCTCCTCTGTTTCCGAAGGCAGTGGCAGCCCAATTAACAAGTCCACAGAGATGTGTAGCCCTGCATCTACATCGCCCTTACACCGGAGGACCACTGGCCCTATAAGGCGTGCAAAGGGAGGTTGGACAGCAGAAGAGGATGAGACATTAAGGAATGCTGTTGCAACTTACAAGGGCAAGAATTGGAAGAAAATAGCTGAGTATTTTCCTGATAGAACAGAAGTTCAATGCCTTCACAGATGGCAAAAAGTTCTCAATCCAGAACTTGTTAAAGGTTTTGTGCAGGAGGATGATAAAATTGTTGAACTGGTCTCCAAATTTGGGCCTACAAAATGGTCTCTTATAGCCAGGTCTTTGCCTGGTCGAATAGGGAAACAGTGCCGAGAGCGATGGCACAATCATCTTAATCCTGACATAAAGAAAGATGCCTGGACTTTGGACGAGGAATTGGCCCTGATAAATGCTCATCATACCCATGGGAACAAATGGGCTGAAATAGCCAAGGTTCTTCCTGGAAGAACTGATAATGCAATAAAGAACCACTGGAATAGTTCTTTGAAGAAAAAGTTGGATTTTTATTTAGCTACAGGAAGACTTCCACCAGTGCCAAAGAACAATGCACAAGTTGCTGTCAAAGATACAATTAGACTTTCTACTTCTAAAACAATTCCGGTTTGTTCAAGTAAAGAATTAAATTTAGCTGTTAAAACACCATCTGAACCTACAACTATTAGTATGCTAGATGAGAGTGGCATGAATCAGTCATCCCCAGGGACAGTTAGAGATGTTCGTGATTCTTCAAGTGTTCCTGCTAATGAATCTGCTGATTCTGACGGTGTAGAATGCAAACCTGGATCATCCAACATAGATCTCGCCTGTAGCAACTCAAAGCCTGTGTCAATAGTTAATTTCAGAATAACTTGTGGGACAAATTTTGAGAATTCTGGACTAAGTGTAAACTCAAAGTTTGAGCGGTGTGTAGACAATTGTGAAATGAGTTGCAGCAGCAGGTCTATCAGAACAACTTTCTCCCAAGAAAGTCCTACCTGTGGTTCTTTGTGTTATGAGCCGCCTCAGTTAAGTGGTTCAGTTCCTTTAGATTATCTTTCTTTAAGCCTGCAGAATGAGTACTGCTCTAATCCGATGTTGTCGCCTATCGATTACTTCACTCCAGCTAGTGTGAAGGGTAGTGAATTATGCAGTGAGACACCTGAATCATTTTTGAAAAAAGCTGCTGATACTTTTCCAAACACTCCTTCCATATTGAGGAGGAGACGGAACAGAGTCGAAACACAAACCCCTCCTTGTAAACTTTTGAAGGTAGAAAATCATTCTTGTACTTCTAATGAATCAGAGAGAACCAAGGATAATTCTGGTTCTGAGGTTGGGAGGTTCTCTGAGAATCCAGCAAGCCATGACAATGAGAGTGACCTTCCCAAGGCTTACAATGCATCTCCACCATACCAGTTGAGATCCAAGCGAACAGCTGTTCTCAAGTCCGTGGAGAAACAACTAGAATTTGCATTTGAGGAAAAAAAAATGAAAGCAATTTCAACTGAATGA 1623 0.4184 MLELKTEACCLENKQSTAASCSSVSEGSGSPINKSTEMCSPASTSPLHRRTTGPIRRAKGGWTAEEDETLRNAVATYKGKNWKKIAEYFPDRTEVQCLHRWQKVLNPELVKGFVQEDDKIVELVSKFGPTKWSLIARSLPGRIGKQCRERWHNHLNPDIKKDAWTLDEELALINAHHTHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLDFYLATGRLPPVPKNNAQVAVKDTIRLSTSKTIPVCSSKELNLAVKTPSEPTTISMLDESGMNQSSPGTVRDVRDSSSVPANESADSDGVECKPGSSNIDLACSNSKPVSIVNFRITCGTNFENSGLSVNSKFERCVDNCEMSCSSRSIRTTFSQESPTCGSLCYEPPQLSGSVPLDYLSLSLQNEYCSNPMLSPIDYFTPASVKGSELCSETPESFLKKAADTFPNTPSILRRRRNRVETQTPPCKLLKVENHSCTSNESERTKDNSGSEVGRFSENPASHDNESDLPKAYNASPPYQLRSKRTAVLKSVEKQLEFAFEEKKMKAISTE 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02152 540 Gene3D - 58 111 - -
Arst4g02152 540 ProSiteProfiles Myb-like domain profile. 115 155 IPR001005 -
Arst4g02152 540 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 109 IPR017930 -
Arst4g02152 540 PANTHER MYB PROTEIN-RELATED 59 111 - -
Arst4g02152 540 CDD SANT 163 206 IPR001005 -
Arst4g02152 540 MobiDBLite consensus disorder prediction 262 294 - -
Arst4g02152 540 SUPERFAMILY Homeodomain-like 55 111 IPR009057 -
Arst4g02152 540 CDD SANT 115 155 IPR001005 -
Arst4g02152 540 ProSiteProfiles Myb-like domain profile. 156 206 IPR001005 -
Arst4g02152 540 MobiDBLite consensus disorder prediction 21 55 - -
Arst4g02152 540 CDD SANT 62 105 IPR001005 -
Arst4g02152 540 MobiDBLite consensus disorder prediction 21 50 - -
Arst4g02152 540 MobiDBLite consensus disorder prediction 460 512 - -
Arst4g02152 540 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 156 210 IPR017930 -
Arst4g02152 540 Gene3D - 114 160 - -
Arst4g02152 540 Pfam Myb-like DNA-binding domain 115 155 IPR001005 -
Arst4g02152 540 Pfam Myb-like DNA-binding domain 59 105 IPR001005 -
Arst4g02152 540 Pfam Myb-like DNA-binding domain 161 204 IPR001005 -
Arst4g02152 540 Gene3D - 162 228 - -
Arst4g02152 540 MobiDBLite consensus disorder prediction 262 303 - -
Arst4g02152 540 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 115 155 IPR017930 -
Arst4g02152 540 FunFam Transcription factor MYB3R-2 162 228 - -
Arst4g02152 540 FunFam Transcriptional activator Myb isoform A 113 161 - -
Arst4g02152 540 SMART sant 58 107 IPR001005 -
Arst4g02152 540 SMART sant 114 157 IPR001005 -
Arst4g02152 540 SMART sant 160 208 IPR001005 -
Arst4g02152 540 FunFam Transcriptional activator Myb isoform A 58 110 - -
Arst4g02152 540 SUPERFAMILY Homeodomain-like 134 211 IPR009057 -
Arst4g02152 540 ProSiteProfiles Myb-like domain profile. 54 105 IPR001005 -
Arst4g02152 540 MobiDBLite consensus disorder prediction 466 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02152 Arst-Chr4 68507695 68512580 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02152 49 534 MYB Transcription Factor Family AT5G02320 49.206 1.25e-129 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst4g02152 Myb_DNA-binding 7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02152 K09422 - gmx:778081 768.074