Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02117 ATGGCGGACAGGGCAAGGATGGCTAACATACCCATGCAAGAGCCAGCACAAAAGTGTCCAAGATGTGAATCTACCAACACAAAGTTTTGCTACTTCAACAACTACAGCCTCTCTCAGCCCCGGCACTTCTGCAAGACCTGCCGGAGGTACTGGACCCGAGGCGGCGCTTTGAGAAATGTTCCGGTCGGCGGCGGCTGCCGGAGGAACAAGAGGACTAAAGGAACAACCACCAGCAACAACGGCTCCAAGTCACCACCACCGAGCTCTGATCGCGGAGGTCCCACCGTCTCTGGTGGCAGCTTTGCCTCTGAAATCGCAGGCCTAAGCCCTCCGGTGCCCTCGTCGCTGAGATTCATGGCTCCATTAATGCATCATCAGCAACTTGGAGATCACTTTTCAGGAGTTGGTGGCGGTGATTTAGGCCTAAACTACGCCGCAATTTCTGGTCCAATGGGAGGAATGGGTGACTTAAATTTTCACATAGGAAGTGCTTTGCGCAGTGATGTCACCGGTGGCGGCAATGGAGGCAGTTCTCTTCTATCAGCTGCAGGTTTGGAACAATGGAGGGTTCCACAAACACAACAATTTTCTTTCTTGACAGGTTTCGAAGCTTCATCACATGGCCTATACCAATTTGAAAATAGTACTAGTGAGGGTTCTGGATACGGCGGAGGCAGCAGTGGTGGTGGCGGTGCTATTCGGCCGAATAAGGTGTCGACTTTTGCCTCAGTAGTGAAGATGGAAGAAAGTAATAATAATTTGCCAAGGCAGTTTTTGGGGATGAATAATAATTCATCAAGTAATAGTGAGCATTTTGTTCCTGCTTCTTGGACACACCTTTCTGGTTTTACTTCTTCCAATACTACCAATAATCCTCCATAG 882 0.4943 MADRARMANIPMQEPAQKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRTKGTTTSNNGSKSPPPSSDRGGPTVSGGSFASEIAGLSPPVPSSLRFMAPLMHHQQLGDHFSGVGGGDLGLNYAAISGPMGGMGDLNFHIGSALRSDVTGGGNGGSSLLSAAGLEQWRVPQTQQFSFLTGFEASSHGLYQFENSTSEGSGYGGGSSGGGGAIRPNKVSTFASVVKMEESNNNLPRQFLGMNNNSSSNSEHFVPASWTHLSGFTSSNTTNNPP 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02117 293 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 13 200 IPR045174 GO:0003700|GO:0006355
Arst4g02117 293 ProSitePatterns Zinc finger Dof-type signature. 19 55 IPR003851 GO:0003677|GO:0006355
Arst4g02117 293 ProSiteProfiles Zinc finger Dof-type profile. 17 71 IPR003851 GO:0003677|GO:0006355
Arst4g02117 293 MobiDBLite consensus disorder prediction 70 96 - -
Arst4g02117 293 MobiDBLite consensus disorder prediction 61 104 - -
Arst4g02117 293 Pfam Dof domain, zinc finger 16 71 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02117 Arst-Chr4 66628142 66629715 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02117 1 289 C2C2-Dof Transcription Factor Family AT3G55370 40.575 2.24e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst4g02117 zf-Dof 6.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02117 - - gmx:100796820 281.567