Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02104 ATGGAGTGTGAAGTGGGAGTTCAAGGTTTGGATCTGCATGCAAAGGTGGCAAAAACGGAAACAGTAGACCCTATTCTTGGTCTTGGAGCCATGAATCATCATCACCACAACAATCATCATCATCATGATGCAGAGATTTATGCAGATGCTGATGATGCAGATAAAGATTTGTGGCTCAACACAACAACAGAACAAGAAGATTTACTTGTTGGGGATGTGAAAACAGATGCATCTATGTTCTACGACCAATTCCCTCCTCTCCCTGATTTCCCATGCATGTCTTCATCATCGTCTTCGTCTTCAACTCCAACACTTCCATTGAAGAATCTAGCATGCTCAACCACCTCGACCACAACGGCTACCGCAGCAACCTCTTCGTCTTCGTCGTCTGCTTCTTCTTGGGCAGTTCTGAAGCCAGAAGCGGAGGATAATAACAACGGAGAGTGGAACTGCAGTAATAAACAGCAACTTTACATGCAACATCATGATCCACTGGACGCAACGGGAGCGTTGTCCTCAACAGCTTCCATGGAGATTTCACAGCCAAAGTTTCCGGATCAAGATGGATTTGACGGTGTTGTTGGTGAGGTTGATTGCATGGATGATGTGATGGACACTTTTGGGTACATGGAGCTTCTAGAAGCCAACGAGTTCTTTGACCCTTCGTCTATCTTCCAAGGCGAAGAGAATCCCTTAGCGGAATTCACACAAGAGGATCAGGTTTTGCCACAGCAAGAAGAACAACAGAAGCAAGAAAAACCTGCAGTAGTTCATAATCAAAATGATCTTGTTGTTCTTAGACCACAGCAAGAAGCAGTAGTGGAAGGTGTTAGTAACAATAATTATGAACAGCTTCTTGGGTTGTGCGAAGCCAGTAACAATAACGATGTAGAGATCCAAGCAGATGCTGGTGGTGGTGGTGCAATTGCGGATGATGAAATGAGTATGGTGTTCCTGGAATGGCTGAAGTCGAACAAGGATAGCGTATCCGCGAGCGATTTGAGGAGCGTGAAGCTTAAGAAATCCACAATAGAGAGTGCTGCTAAGCGATTGGGCGGTGGAAAAGAAGCTATGAAGCAATTGTTGAAGCTGATTCTTGAATGGGTTCAAACCAGCCACCTTCAGAGTAAAAGGCGCAAGGAAAATAATAACGATAACGCAGTGGCAAACCCTTTCACGGAACAGTTTCAAAATCCAATTCATCAAAACCAGAACAACGCAAATGCTTCGAGTTCTTTTGTCATTGAACCAAACACATGTTTCACCCAGCAGCAACCATGGATGGATCAAGCACCTCTAATGGCAGCCGCTCCTCCGCCTCAGTTTCAGCCTCAGCCGCAATTTCAACAACCCATGGTTGGGTATGTTGGCGACCCTTACACAAACGCTGCTTCTGCAAACACCATGAATGGCAGCAATAATTTTCAGGCTGGTAATGAATACCATATGCTGGAATCAGCGAACTCATGGCCTCCTTCTCAATACACTGTTACTGCTTACTATACCCAGCCATTTGGGGACCATTGTTTTCAACCTCCGGCGGCGGGTGGCTTCGGTAACCAGTACCCTTATCAGTTTTTCCATGGACATGGTGATGGATTGATGAGATTAGGACCCTCAGCTACAAAAGAAGCGAGGAAGAAGCGGATGGCGAGGCAGAGAAGGCTTTCCTCTCATTCTAGGCATCATATTAATCTACAGAGTCAGGGTTCTGATCCAAATGCAAGATTGGGTGTTGGTGGTGAAAATTGCACTGGTGTTGTATCTGCAGCTCCGGCTAATTGGGTGTATTGGCCAACTATGGCTGGTGCTGTTGCTTCCGTTGCGCCCGTGGCTCCCGCGGAACCGTCGGCTGTGGTGGATAAACCTGCCATGCAGACACAGAATTATCATCATCAGGGTCGGCTCTCATCTGATAGGAGACAGGGTTGGAAGTCGGAGAAGAACTTACGATTCCTTTTACAAAAGGTGTTGAAGCAAAGCGATGTTGGAAGTCTGGGAAGAATTGTTCTACCAAAAAAAGAGGCAGAAACACATCTACCAGAACTAGAGGCAAGGGATGGAATCACCATAACAATGGAAGATATTGGCACCTCTCGTGTTTGGAATATGCGCTATAGCATCAGATACTGGCCAAACAATAAAAGCAGGATGTATTTGCTAGAGAACACAGGTGACTTTGTTAAAGCCAATGGACTCCAAGAGGGAGATTTCATAGTGATATATTCAGATGTGAAGTGTTTATTTTCTTGA 2253 0.4549 MECEVGVQGLDLHAKVAKTETVDPILGLGAMNHHHHNNHHHHDAEIYADADDADKDLWLNTTTEQEDLLVGDVKTDASMFYDQFPPLPDFPCMSSSSSSSSTPTLPLKNLACSTTSTTTATAATSSSSSSASSWAVLKPEAEDNNNGEWNCSNKQQLYMQHHDPLDATGALSSTASMEISQPKFPDQDGFDGVVGEVDCMDDVMDTFGYMELLEANEFFDPSSIFQGEENPLAEFTQEDQVLPQQEEQQKQEKPAVVHNQNDLVVLRPQQEAVVEGVSNNNYEQLLGLCEASNNNDVEIQADAGGGGAIADDEMSMVFLEWLKSNKDSVSASDLRSVKLKKSTIESAAKRLGGGKEAMKQLLKLILEWVQTSHLQSKRRKENNNDNAVANPFTEQFQNPIHQNQNNANASSSFVIEPNTCFTQQQPWMDQAPLMAAAPPPQFQPQPQFQQPMVGYVGDPYTNAASANTMNGSNNFQAGNEYHMLESANSWPPSQYTVTAYYTQPFGDHCFQPPAAGGFGNQYPYQFFHGHGDGLMRLGPSATKEARKKRMARQRRLSSHSRHHINLQSQGSDPNARLGVGGENCTGVVSAAPANWVYWPTMAGAVASVAPVAPAEPSAVVDKPAMQTQNYHHQGRLSSDRRQGWKSEKNLRFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELEARDGITITMEDIGTSRVWNMRYSIRYWPNNKSRMYLLENTGDFVKANGLQEGDFIVIYSDVKCLFS 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02104 750 ProSiteProfiles B3 DNA-binding domain profile. 654 750 IPR003340 GO:0003677
Arst4g02104 750 MobiDBLite consensus disorder prediction 120 145 - -
Arst4g02104 750 MobiDBLite consensus disorder prediction 551 575 - -
Arst4g02104 750 MobiDBLite consensus disorder prediction 120 135 - -
Arst4g02104 750 Gene3D - 644 749 IPR015300 -
Arst4g02104 750 SUPERFAMILY DNA-binding pseudobarrel domain 653 744 IPR015300 -
Arst4g02104 750 CDD BfiI_C_EcoRII_N_B3 652 745 - -
Arst4g02104 750 SMART B3_2 654 750 IPR003340 GO:0003677
Arst4g02104 750 Pfam B3 DNA binding domain 655 742 IPR003340 GO:0003677
Arst4g02104 750 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 321 747 IPR044800 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02104 Arst-Chr4 64811059 64815627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02104 43 747 B3 DNA Binding Superfamily AT3G24650 42.857 1.66e-139 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst4g02104 B3 8.1e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02104 K09287 - gmx:100795226 728.783