Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02090 ATGGAAGAAGACTTCGACATGCCCCAAGCTGAGGAGATGAACGAAGACTTTGATCTCCCCGACGAGGACCCAATCCTGAAGGTTGGCGAGGAGAAGGAGATCGGAAACCAAGGCCTCAAGAAGAAGCTCCTCAAGGAAGGTCAAGGCTGGGATACCCCCGAAGTTGGTGATGAAGTCGAAGTTCACTACACGGGGACTCTGCTTGATGGAACGAAGTTCGATTCGAGCCGCGATAGGGATAGCACTTTCAAGTTCACTCTCGGACAAGGGCAAGTAATTAAAGGATGGGATGAAGGCATTAAAACCATGAAAAAGGCGGAAAATGCTCTTTTCACCATCCCTCCTGCGCTAGCCTATGGTGCATCTGGCTCACCTCCAACTATTCCTCCGAATGCAACACTCCAGTTTGATGTCGAGCTTTTGTCTTGGACTAGTGTAAAGGACATATGTAAGGATGGTGGTATATTTAAGAAAATACTTAAGGAGGGGGAAGGATGGGAAAACCCCAAGGATCCTGATGAAGTATTAGTTAAGTATGAGGTTCTTCTGGAAGATGGAAAGGCTGTGGCTAAGTCTGATGGAGTGGAGTTCAGTGTCAGAGAGGGTCACTATTGTCCTGCATTGTCAAAGGCTATTAAAACCATGAAGAAGGGAGAGAAAGTTATTTTGACAGTGAAGCCACAATATGGATTTGGTGAGAAAGGGAAGCCAGCAGATGGTGATGAAGGAGCAGTTCCACCAAACGCAACATTGCAGATTACTCTCGAGTTAGTCTCCTGGAAGACTGTGTCTGAGGTAACTGATGACAAGAAAGTGGTGAAGAAGATACTCAGTGAAGGGCAAGGATATGAGCGGCCAAATGAGGGGGCTGTTGTGAAAGTGAAACTGACTGGTAAGCTGAAAGATGGCACTGTCTTTGTGACAAAGGGCCATGAAGAGGAGCTGTTTCAATTTAGAACAGACGAAGAGCAAGTCATTGATGGGCTTGATAGAGGTGTAATGTCCATGAAGAAAGGTGAAGTGGCATTACTGACTATTGCACCTGAGTAGNNNNNNGAGTTGGCTGTTGTTCCTTCTAACTCAACTGTGTATTATGAGGTGGAGCTAGTTTCGTTCGAGAAGGAGAAGGAGTCCTGGGATCTGAACACTCAAGAGAAAATTGAAGCTGCTGGTAAGAAGAAAGAAGAAGGAAATGTATTATTTAAAGCTGCTAAATATGTAAGAGCTTCCAAAAGATATGATAAGGCAGTAAAGTTTATAGAATATGATTCCTCCTTCAGCACTGATGAGAAAAAACAGGCCAAGACCTTGAAGGTTGCCTGCAATCTGAACAATGCTGCTTGCAAGTTGAAGTTAAAAGAATACAAAGAAGCAGAGAAATTGTGTACAAAGGTCCTGGAGCTTGAGAGTACCAATGTGAAAGCTCTTTACAGAAGGGCCCAGGCATATATGCAGTTGGCTGATTTGGATTTGGCTGAATTTGACATTAAGAAAGCTCTTGATATTGATCCTGACAATAGGGAGGTAAAGCTGGAGTACAGGACTTTGAAGGATAAGGTTAAGGAGTATAACAAAAAGGAGCAGAAGTTTTATGGAAACATATTCAGCAAGTTGACAAAGGCTGGTTCTTGA 1632 0.4375 MEEDFDMPQAEEMNEDFDLPDEDPILKVGEEKEIGNQGLKKKLLKEGQGWDTPEVGDEVEVHYTGTLLDGTKFDSSRDRDSTFKFTLGQGQVIKGWDEGIKTMKKAENALFTIPPALAYGASGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIFKKILKEGEGWENPKDPDEVLVKYEVLLEDGKAVAKSDGVEFSVREGHYCPALSKAIKTMKKGEKVILTVKPQYGFGEKGKPADGDEGAVPPNATLQITLELVSWKTVSEVTDDKKVVKKILSEGQGYERPNEGAVVKVKLTGKLKDGTVFVTKGHEEELFQFRTDEEQVIDGLDRGVMSMKKGEVALLTIAPEYXXXELAVVPSNSTVYYEVELVSFEKEKESWDLNTQEKIEAAGKKKEEGNVLFKAAKYVRASKRYDKAVKFIEYDSSFSTDEKKQAKTLKVACNLNNAACKLKLKEYKEAEKLCTKVLELESTNVKALYRRAQAYMQLADLDLAEFDIKKALDIDPDNREVKLEYRTLKDKVKEYNKKEQKFYGNIFSKLTKAGS 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02090 544 Gene3D - 32 147 IPR046357 GO:0003755
Arst4g02090 544 SUPERFAMILY FKBP-like 265 391 - -
Arst4g02090 544 SUPERFAMILY FKBP-like 33 149 - -
Arst4g02090 544 Coils Coil 507 527 - -
Arst4g02090 544 Gene3D - 262 375 IPR046357 GO:0003755
Arst4g02090 544 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 172 261 IPR001179 GO:0003755
Arst4g02090 544 Gene3D - 148 261 IPR046357 GO:0003755
Arst4g02090 544 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 153 264 - -
Arst4g02090 544 MobiDBLite consensus disorder prediction 1 32 - -
Arst4g02090 544 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 283 371 IPR001179 GO:0003755
Arst4g02090 544 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 52 141 IPR001179 GO:0003755
Arst4g02090 544 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 167 258 IPR001179 GO:0003755
Arst4g02090 544 FunFam Peptidylprolyl isomerase 148 261 - -
Arst4g02090 544 SMART tpr_5 440 473 IPR019734 GO:0005515
Arst4g02090 544 SMART tpr_5 474 507 IPR019734 GO:0005515
Arst4g02090 544 SMART tpr_5 391 424 IPR019734 GO:0005515
Arst4g02090 544 SUPERFAMILY FKBP-like 148 264 - -
Arst4g02090 544 MobiDBLite consensus disorder prediction 1 19 - -
Arst4g02090 544 Pfam Tetratricopeptide repeat 474 507 IPR001440 GO:0005515
Arst4g02090 544 SUPERFAMILY TPR-like 380 538 IPR011990 GO:0005515
Arst4g02090 544 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 56 144 IPR001179 GO:0003755
Arst4g02090 544 Gene3D Tetratricopeptide repeat domain 377 534 IPR011990 GO:0005515
Arst4g02090 544 FunFam Peptidylprolyl isomerase 29 147 - -
Arst4g02090 544 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 289 374 IPR001179 GO:0003755
Arst4g02090 544 ProSiteProfiles TPR repeat profile. 474 507 IPR019734 GO:0005515
Arst4g02090 544 FunFam Peptidylprolyl isomerase 379 534 - -
Arst4g02090 544 FunFam Peptidylprolyl isomerase 262 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02090 Arst-Chr4 63160814 63165397 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02090 25 539 Calmodulin-binding Proteins AT3G25230 79.350 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02090 K09571 - gmx:100812632 893.264