Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02080 ATGATGACTATTGAGGAAATGGCTGGGATGGATGTCCTATGCAGTGATAAAACTTTAACATTGACAATGAATAAGCTCAGTGTTGATAGAAACTTGATTGAGCTATTTACTAAAGGTGTTGAGAAGGAGCATGTTATCCTTCTTACTGCAAGGGCCTCTAGGACCGAATATCAAGATGCTATAGATGCTGCAATTGTTGGGATGTTTGCTGATCCAAAGGAGGCTCAAGCCAGAATCAGGGGGGTCCATTTTCTTCCATTCAATCCTATAGACAAGAGGACTACTCTAACTTACATTGATTTTCATGGAAATTGGCACCGTGTGAGCAAAGGAGCTCCGGAGCAGGAAAAACTTGTTTCATTGGCAGCTTCTTATGATGGTTATAAGGATGATAAAGGCTTAATTTCTTTTCTCTTTATTTACATCAGAACCTTTTGCAACTGCAAAAAAGGATGTTAG 459 0.3943 MMTIEEMAGMDVLCSDKTLTLTMNKLSVDRNLIELFTKGVEKEHVILLTARASRTEYQDAIDAAIVGMFADPKEAQARIRGVHFLPFNPIDKRTTLTYIDFHGNWHRVSKGAPEQEKLVSLAASYDGYKDDKGLISFLFIYIRTFCNCKKGC 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02080 152 PANTHER CALCIUM-TRANSPORTING ATPASE 1 122 - -
Arst4g02080 152 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 20 115 IPR023299 GO:0000166
Arst4g02080 152 Gene3D - 26 115 IPR023299 GO:0000166
Arst4g02080 152 Gene3D - 11 25 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02080 Arst-Chr4 61803589 61805582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02080 1 115 Primary Pumps ATPases AT2G24520 76.522 3.49e-58 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02080 K01535 - adu:107484756 310.071