Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02018 ATGGAAAATAGTTCAGGAATTTCAACAACATTGTTCATCACCTTTTTACTACTAATTCCTTCTTGTTGTGTTATCTTTGTGAATTGCAAAACCCTTGAAAGTTCATCACTATCACTAGATTTGACGATCCCAGACATTTTAGGGTTCTTAGACGAGAGACTAGCTCTTATATTCCCAATAATTCAAGCATTCAAGACCACAATAACTTCTGACCCGTTGGGTATAACCTCAACATGGAGTGGTCCAAACATATGCAACTACACTGGCTTCTACTGCGACAACCCACCGGACAACAAAACCGCCGTAACCGTCGCATCCATAGATTTCAACGGCTTCCAGCTCTCCGCTCCGTCCCTCGACGGCTTCATAGACCAGCTCTCGGACTTGGCAATATTTCACGCCAACTCCAACAACTTCTCTGGCACCATTTCTCCGAACGTAGCAAAACTAAAGTTCCTGTACGAACTGGACTTGAGTAACAACCTCCTCTCCGGCGTGTTCCCCGTTTCCGTTCTCAACATGCCCACATTGTCCTTTCTCGACATAAGGTACAATTTGTTTTCCGGAACAGTGCCACCCAGCATATTTACCCAAGCTTTGGACGTACTTTTTCTGAACAACAACAATTTTGCCCTGACTCTTCCCAACAACTTAGGGGACACAAAGGCTCTCTACCTAACTCTCGCAAACAACAAATTCACCGGCCCCATTCCACGAAGCATCAGAAAAGCCTCGGCCACGCTGACCGAGGTTCTCTTCCTCAACAACCTCCTGACCGGTTGCCTGCCCTATGAGATCGGGTTCTTGAAAAAGGCCACCCTATTCGACGCCGGAAACAACCTCCTCACAGGGCCGTTGCCGTCCTCCTTGGGCTGCTTGGAGAGCGTGGAGCAGCTAAACCTAGCCAGGAATCAGTTGTACGGACAAATTCCGGAAGTGGTGTGCGCACTTGGTAACTTGGCGAATTTGTCACTGTCCTATAACTACTTCACCAAGGTGGGACCACTGTGCAGGAATATGATTAAGAAGGGTGTTGCTGATGTGAGGAAGAACTGTATTTCGGGGCTTCCGAATCAGAGATCGGCGCAGGAGTGTTTTGCGTTTTTCTTGTCGCGGAGAAGTTGCGGGAACCCGGCGTGGTTTAACTTCTTACCGTGTAAGATTCCGCCGTGGAAGAAACCTAATAGTGAGAGCAATAGTACAGTAACAACGACGACGAAGAGGAATTTGCTTTCATATTCTGCTCCTTTCAGAAATAGATTGCTTTTGTAG 1272 0.4717 MENSSGISTTLFITFLLLIPSCCVIFVNCKTLESSSLSLDLTIPDILGFLDERLALIFPIIQAFKTTITSDPLGITSTWSGPNICNYTGFYCDNPPDNKTAVTVASIDFNGFQLSAPSLDGFIDQLSDLAIFHANSNNFSGTISPNVAKLKFLYELDLSNNLLSGVFPVSVLNMPTLSFLDIRYNLFSGTVPPSIFTQALDVLFLNNNNFALTLPNNLGDTKALYLTLANNKFTGPIPRSIRKASATLTEVLFLNNLLTGCLPYEIGFLKKATLFDAGNNLLTGPLPSSLGCLESVEQLNLARNQLYGQIPEVVCALGNLANLSLSYNYFTKVGPLCRNMIKKGVADVRKNCISGLPNQRSAQECFAFFLSRRSCGNPAWFNFLPCKIPPWKKPNSESNSTVTTTTKRNLLSYSAPFRNRLLL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02018 423 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 31 396 - -
Arst4g02018 423 Gene3D Ribonuclease Inhibitor 249 372 IPR032675 -
Arst4g02018 423 SUPERFAMILY L domain-like 68 354 - -
Arst4g02018 423 Gene3D Ribonuclease Inhibitor 199 248 IPR032675 -
Arst4g02018 423 Gene3D Ribonuclease Inhibitor 60 198 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02018 Arst-Chr4 52599852 52603056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02018 40 376 Leucine-rich Repeat extension Gene Families AT3G24480 46.018 1.45e-93 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02018 - - gmx:100813314 576.244