Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02014 ATGAGAAAGCCATGCTGTGAAACCAACAAAGACATGAACAAAGGAGCTTGGTCCAAACAAGAAGACCAAAAACTCATTGACTATATCAACAAACATGGCGATATTTGCTGGCGTACCCTCCCTCAAGCTGCAGGTCTATTAAGGTGTGGCAAAAGCTGTAGGCTAAGATGGATAAACTATTTGCGCCCAGACCTTAAAAGAGGCAACTTTGCTGAAGATGAAGAAGATCTCATCATCAAGCTTCATGCACTTCTAGGCAACCGGTGGTCACTAATAGCGGGAAGATTGCCGGGACGGACGGACAATGAAGTGAAGAACTATTGGAACTCTTACATAAGAAGAAAGCTAATTAGCAAAGGCATTGATCCAAATAACCACCGTTTAATAACCCAAAAAAATCTAATCCCTACTCCACCCATTTCCGATTGTTCAAAATCATCATCTTCTGGCTTATTGAAGAAAAAAAACAAGAATAATGATGAGGCAACAACCAATAAATCCAATAACATTGACAACTATGGTTATCATCAAGTAGGCTCATCAGAAGAGGATGAGTCTAATAATAATAATAATAACAATAAAGGCTTATTATTGCCGGATTTAAACCTTGATCTCACTATCAGCATTCCTTCATCATCATCAGCTGAAAACAGCGATCTCAAACCAACAATTCATCATGAATCAAATTCTTCAGGGCGGGAACGGAACTTGATGATGGCTGGTAATTCCCCTCCAACTCTTCTTCTATTTCAGTAA 756 0.3929 MRKPCCETNKDMNKGAWSKQEDQKLIDYINKHGDICWRTLPQAAGLLRCGKSCRLRWINYLRPDLKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSYIRRKLISKGIDPNNHRLITQKNLIPTPPISDCSKSSSSGLLKKKNKNNDEATTNKSNNIDNYGYHQVGSSEEDESNNNNNNNKGLLLPDLNLDLTISIPSSSSAENSDLKPTIHHESNSSGRERNLMMAGNSPPTLLLFQ 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02014 251 CDD SANT 69 112 IPR001005 -
Arst4g02014 251 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Arst4g02014 251 SMART sant 66 114 IPR001005 -
Arst4g02014 251 SMART sant 13 63 IPR001005 -
Arst4g02014 251 CDD SANT 16 61 IPR001005 -
Arst4g02014 251 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Arst4g02014 251 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Arst4g02014 251 Gene3D - 69 135 - -
Arst4g02014 251 FunFam MYB transcription factor 68 129 - -
Arst4g02014 251 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 208 - -
Arst4g02014 251 Gene3D - 14 66 - -
Arst4g02014 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Arst4g02014 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Arst4g02014 251 FunFam MYB-related transcription factor 13 66 - -
Arst4g02014 251 MobiDBLite consensus disorder prediction 212 251 - -
Arst4g02014 251 MobiDBLite consensus disorder prediction 162 195 - -
Arst4g02014 251 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Arst4g02014 251 MobiDBLite consensus disorder prediction 130 195 - -
Arst4g02014 251 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Arst4g02014 251 MobiDBLite consensus disorder prediction 130 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02014 Arst-Chr4 51839295 51841224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02014 2 210 MYB Transcription Factor Family AT4G38620 54.167 1.24e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst4g02014 Myb_DNA-binding 3.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02014 K09422 - gmx:100814923 279.256