Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02004 ATGCAGACCAGCTGTGTTGTGGATGAAAAATTTGTCCCAAAGGTGGGAATGATTTTCAAGAAACTAGAAGAAGCTGAAAAATTCTACAAACATTATTCAAAACTTGCCGATTTTTCTACGAAAATAAAGAACATGACTCGGGACAGAGACAAGATTAAGAATCAACTAATTGTTTGCACCAGAGAGGGAAAGTGGAAATTCAAGATATCTTCAATTTTGAAGACAAACCCTTCAGCTGGGTTAAATTGTTTGGCTAGAATTTACGTACACATAATGAAGGATGTTGGTCTTTGGACAATTTCTAAAGTTGTTTTGAATCACTCACATCCTTGTTGTCCAGACCAAGCTAAGATGCTCAAACAACACAGAGAGCTTAGTATGTTCGTGCGTCGCACTATCAAAACCCATGAGGAAGCCGAAATCAGACCAAGAAAAACTTACCAATCACTTGTGGCAGCAACTGGCAGCCACCGTGAACTAGGTTTTATAGAAAAAGACTTCAAGAATTACATCACAAGGAAAGTACGAAATATTTCTAAAGAAGACGATGCCAAAGAATTTGGGAAGTACCTAGTAAGAATGAAAGAGAAGAACCAAAATTTTTTCTTTGAGCTCAACCTTGAAGGCAATTACTGCATTAAACATACATTCTGGGTTGATGCAAGAAGCAGGGCTGCATTTGATTATTTTGGAGATATGGTTTCATTTGACATCACCTATAAACAAACAGGTTTCACAACATATGAAGTCATAGAGCAGGTTTTCAACTCCACATTCAACAAGTTTGCCGTCACCTACGATACAGTATCACGAGGTGTAAAGTGCCATTGCTTGCTATTTGAGTCTAGGGGCATATTGTGCCGCCATTCCCTAAGCGTCCTAAGCTTTGAGCGAGTGGATAGCGTGGCACCGAAATACATATTAGAACGCTGGAGCAAGAACATAAAGAGGAGGCACACACACATCAAGAGCAGCCAAGATAAACCTATACTGGAGCCAAGAAGTAAGAGATTTGACGAATTGGTGTTTCGGTCACAAAATATATGTGAATTTGCATCCAAGTCTGAAGATTTGACCAGAATTCTGCACCGAGCATTTGATAAGGTCATGGCGGAGATGGAAGAATATCAGGAGAGAAGCAAAGAAAAAAGTTTGTTAACCCACGAAGAAGCGACATTAAGCAATGTGAATGACTTTCAAAGCCCACCACGTGTCAAAACAAGCGGTCGGCCCAAGAATAGACTTGGATCAAACCTGAAAAAAAAGATCTCAAATGCCATGAAGAAAAAGAAAAAGACAGCTCCAAGCGAGATAAAATTGACTTGCTTTTGA 1332 0.3949 MQTSCVVDEKFVPKVGMIFKKLEEAEKFYKHYSKLADFSTKIKNMTRDRDKIKNQLIVCTREGKWKFKISSILKTNPSAGLNCLARIYVHIMKDVGLWTISKVVLNHSHPCCPDQAKMLKQHRELSMFVRRTIKTHEEAEIRPRKTYQSLVAATGSHRELGFIEKDFKNYITRKVRNISKEDDAKEFGKYLVRMKEKNQNFFFELNLEGNYCIKHTFWVDARSRAAFDYFGDMVSFDITYKQTGFTTYEVIEQVFNSTFNKFAVTYDTVSRGVKCHCLLFESRGILCRHSLSVLSFERVDSVAPKYILERWSKNIKRRHTHIKSSQDKPILEPRSKRFDELVFRSQNICEFASKSEDLTRILHRAFDKVMAEMEEYQERSKEKSLLTHEEATLSNVNDFQSPPRVKTSGRPKNRLGSNLKKKISNAMKKKKKTAPSEIKLTCF 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02004 443 SMART 26again6 273 300 IPR006564 GO:0008270
Arst4g02004 443 PANTHER OS01G0519700 PROTEIN 240 431 - -
Arst4g02004 443 MobiDBLite consensus disorder prediction 396 417 - -
Arst4g02004 443 ProSiteProfiles Zinc finger SWIM-type profile. 262 298 IPR007527 GO:0008270
Arst4g02004 443 Coils Coil 35 55 - -
Arst4g02004 443 Pfam FAR1 DNA-binding domain 27 112 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02004 Arst-Chr4 49666673 49672137 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst4g02004 FAR1 4.3e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02004 - - adu:107484182 890.182