Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01979 ATGGAGAGTGGTGAGAGAGAATGTTACTATAGAATTCTTGGTGTGAGTTCTGATTCTTCGTTTCAAGAGATAAAGCGTGCTTACAGGAAGCTTGCTATGCAATGGCATCCAGATAGGTGGACAAAAAATCCTTCTTTGCTAGGGGAAGCCAAGCGCAAGTTCCAACAAATTCAAGAAGCTTATTCAGTATTGTCTGATCAAAAGAAAAGAACGATGTACGATGCTGGGTTGTATGATCCTGAGGAGGAAGAGGATGAGGGATTTTTTGAATTTGTGGAAGAAATGGTGTCCCTTATGGCCCAAGTGAGACAAGAGGAGAAGGAGTGTGGGCTTGAAGATTTGCAGTCCATGTTCATGGAAATGCTTGAAGGATTCAAGTCTCCTACCATGTATTGCTCCATGCCTTCTTCGTCGATGTTCGAGTTTGATGAATCCCCGTGCGCGAAAAAGGAAGCTAAAAGGATGCGTTTGGATACAAGCATGATGGATAAAACAGGGTCACATTTTCAAGCACCAGCTAGCCTTAACTTTGTATAA 537 0.4264 MESGERECYYRILGVSSDSSFQEIKRAYRKLAMQWHPDRWTKNPSLLGEAKRKFQQIQEAYSVLSDQKKRTMYDAGLYDPEEEEDEGFFEFVEEMVSLMAQVRQEEKECGLEDLQSMFMEMLEGFKSPTMYCSMPSSSMFEFDESPCAKKEAKRMRLDTSMMDKTGSHFQAPASLNFV 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01979 178 SMART dnaj_3 7 69 IPR001623 -
Arst4g01979 178 Gene3D DnaJ domain 2 98 IPR036869 -
Arst4g01979 178 SUPERFAMILY Chaperone J-domain 6 80 IPR036869 -
Arst4g01979 178 PANTHER PUTATIVE, EXPRESSED-RELATED 4 163 - -
Arst4g01979 178 Pfam DnaJ domain 9 74 IPR001623 -
Arst4g01979 178 PRINTS DnaJ domain signature 10 28 IPR001623 -
Arst4g01979 178 PRINTS DnaJ domain signature 28 43 IPR001623 -
Arst4g01979 178 PRINTS DnaJ domain signature 49 69 IPR001623 -
Arst4g01979 178 ProSiteProfiles dnaJ domain profile. 8 77 IPR001623 -
Arst4g01979 178 CDD DnaJ 8 66 IPR001623 -
Arst4g01979 178 ProSitePatterns Nt-dnaJ domain signature. 54 73 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01979 Arst-Chr4 47692255 47694348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01979 5 75 C2H2 Transcription Factor Family AT1G74250 47.222 3.77e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01979 - - aip:107639293 330.487