Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01958 ATGTCTCTTCCAAGAGCCACAACAGTAGGCAATAATAGTCCAAATAACAGCACTCTTCAACAGCAACTGATGAACAATGAAGGAGGAATAGCAGCAGCACCAACTTCTTCTTCTTCTTGGAATAGGGTTACCAACAACAATAACATCAGAAACTCTGTTAATCCTATACCTCCACAAAAGAGAAGCAAACTTGAAGATAGCGACGAAGATCTGTTCACAGTTCCTGATGTGGAAACCATGCTGAGTGTGCATTCTTCAGCGACAAATACAAATAGTGGTAACGTTGATCAAAGCAACGCAATAGACTCTCAGCTTCAAGCTGCCGTTGCTGGGAAACGCCGCCGTGGAAGAAACCCTGTAGACAAGGAATATAGACGCCTCAAGAGATTATTGAGGAACAGGGTTTCTGCCCAACAAGCACGCGAAAGAAAAAAGGTTTATGTGAATGACTTGGAATCAAGAGCTAAAGACTTGGAAGATAAGAATTCCAACTTGGAAGAGCGCATCTCCACCTTAATCAATGAGAACACCATGCTCCGCAAGGTTCTGATGAATACGAGGCCTAAAGTTGATGAGAATGTTAAAGCATAG 591 0.4264 MSLPRATTVGNNSPNNSTLQQQLMNNEGGIAAAPTSSSSWNRVTNNNNIRNSVNPIPPQKRSKLEDSDEDLFTVPDVETMLSVHSSATNTNSGNVDQSNAIDSQLQAAVAGKRRRGRNPVDKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRAKDLEDKNSNLEERISTLINENTMLRKVLMNTRPKVDENVKA 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01958 196 SMART brlzneu 121 185 IPR004827 GO:0003700|GO:0006355
Arst4g01958 196 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 33 192 IPR044280 GO:0000981|GO:0045944
Arst4g01958 196 MobiDBLite consensus disorder prediction 1 20 - -
Arst4g01958 196 MobiDBLite consensus disorder prediction 29 65 - -
Arst4g01958 196 FunFam Transcription factor HY5 144 185 - -
Arst4g01958 196 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 123 186 IPR004827 GO:0003700|GO:0006355
Arst4g01958 196 Coils Coil 141 182 - -
Arst4g01958 196 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 128 143 IPR004827 GO:0003700|GO:0006355
Arst4g01958 196 MobiDBLite consensus disorder prediction 29 58 - -
Arst4g01958 196 CDD bZIP_HY5-like 135 176 - -
Arst4g01958 196 SUPERFAMILY Leucine zipper domain 124 184 IPR046347 GO:0003700|GO:0006355
Arst4g01958 196 Gene3D Single helix bin 144 185 - -
Arst4g01958 196 Pfam bZIP transcription factor 122 181 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01958 Arst-Chr4 44403663 44434673 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01958 101 193 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 73.118 3.08e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst4g01958 bZIP_1 7.9e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01958 K16241 - ahf:112796739 229.18