Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01957 ATGTCTCTTCCAAGAGCCACAACAGTAGGCAATAATAGTCCAAATAACAGCACTCTTCAACAGCAACTGATGAACAATGAAGGAGGAATAGCAGCAGCACCAACTTCTTCTTCTTCTTGGAATAGGGTTACCAACAACAATAACATCAGAAACTCTGTTAATCCTATACCTCCACAAAAGAGAAGCAAACTTGAAGATAGCGACGAAGATCTGTTCACAGTTCCTGATGTGGAAACCATGCTGAGTGTGCATTCTTCAGCGACAAATACAAATAGTGGTAACGTTGATCAAAGCAACGCAATAGACTCTCAGCTTCAAGCTGCCGTTGCTGGGAAACGCCGCCGTGGAAGAAACCCTGTAGACAAGGAATATAGACGCCTCAAGAGATTATTGAGGAACAGGGTTTCTGCCCAACAAGCACGCGAAAGAAAAAAGGTTTATGTGAATGACTTGGAATCAAGAGCTAAAGACTTGGAAGATAAGAATTCCAACTTGGAAGAGCGCATCTCCACCTTAATCAATGAGAACACCATGCTCCGCAAGGGTTGGATGTATTGGTGCTGA 564 0.4326 MSLPRATTVGNNSPNNSTLQQQLMNNEGGIAAAPTSSSSWNRVTNNNNIRNSVNPIPPQKRSKLEDSDEDLFTVPDVETMLSVHSSATNTNSGNVDQSNAIDSQLQAAVAGKRRRGRNPVDKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRAKDLEDKNSNLEERISTLINENTMLRKGWMYWC 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01957 187 MobiDBLite consensus disorder prediction 1 20 - -
Arst4g01957 187 MobiDBLite consensus disorder prediction 29 65 - -
Arst4g01957 187 Gene3D Single helix bin 144 182 - -
Arst4g01957 187 SMART brlzneu 121 185 IPR004827 GO:0003700|GO:0006355
Arst4g01957 187 SUPERFAMILY Leucine zipper domain 124 180 IPR046347 GO:0003700|GO:0006355
Arst4g01957 187 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 123 180 IPR004827 GO:0003700|GO:0006355
Arst4g01957 187 Pfam bZIP transcription factor 122 181 IPR004827 GO:0003700|GO:0006355
Arst4g01957 187 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 33 180 IPR044280 GO:0000981|GO:0045944
Arst4g01957 187 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 128 143 IPR004827 GO:0003700|GO:0006355
Arst4g01957 187 Coils Coil 141 175 - -
Arst4g01957 187 MobiDBLite consensus disorder prediction 29 58 - -
Arst4g01957 187 FunFam Transcription factor HY5 144 184 - -
Arst4g01957 187 CDD bZIP_HY5-like 135 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01957 Arst-Chr4 44403656 44426582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01957 101 184 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 71.429 2.40e-35 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst4g01957 bZIP_1 3.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01957 K16241 - ahf:112796739 229.18