Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01951 ATGGGAATATATGATCCGTTCCATCAAGTTAGCATGTGGAGTGACAGCTTCAAAGTTGATGGCAGCCTGAATTCAGTTGCTTCCCCAATGTTAATGGTGAACACAAATATGGAGGAAAGTAAGCCTGAGTTTATTCCTCATGAATCAGGGGATCCTTCCGGAGATGATCAAGAGATTACTGATAAAGAAGTCCGTAAGGTGAATCGACGACTGGCACAAAATCGTGAGGCTGCACGGAAAAGCCGGCTGCGGAAGAAGGCTTATGTTCAACAATTAGAAACAAGCAGATTGAAGCTCATGCAATTGGAGCTGGAGATAGAGAAAGCAAGAAAACATGGTCTATATGTAGGGAGTGCATTAGATGATGGTTATACTGGCTCACCGGGAACAATAACCTCAGGGTTAACGGTGTTTGAGATTGAATATGGACACTGGGTTGAACAACAGCATCGGCAGAACGATGAACTCAGAAATGCATTGCACACTCATGCATCTGATATAGAGCTTCATCTACTTGTTGAGAGCAACTTGAATCATTATGCAAATCTTTTCCAGATGAAAGCAGATATGGCAAAGATTGATGTATTTTATTTGATCTCTGGTGCGTGGAAAGCATCGGTTGAACGCCTTTTTCTTTGGATTGGAGGATCCCGTCCATCGCACCTTCTAAATATCATAGTGCCACAACTTGAGCCTTTGAGCGATCAACAAGTCGCCAGTATTAACAACCTCCGTCTATCGTCCCAGCAAGCAGAAGATGCGCTTTCACTGGGGTTGGAGAAACTACAGCAGGGTCTGGTCCACAGCATAGCAGTTGATCCAATGCTTATAGGAAACTATGGATTTCAGATGGCTGCCGCCCTTGACAATATTGAGGCTCTAGAAGGTTTTGTGAGCCAGATCACCTCAGGCAACAAACTCTGCTGCACATGTCTCGAATCTTGA 945 0.4423 MGIYDPFHQVSMWSDSFKVDGSLNSVASPMLMVNTNMEESKPEFIPHESGDPSGDDQEITDKEVRKVNRRLAQNREAARKSRLRKKAYVQQLETSRLKLMQLELEIEKARKHGLYVGSALDDGYTGSPGTITSGLTVFEIEYGHWVEQQHRQNDELRNALHTHASDIELHLLVESNLNHYANLFQMKADMAKIDVFYLISGAWKASVERLFLWIGGSRPSHLLNIIVPQLEPLSDQQVASINNLRLSSQQAEDALSLGLEKLQQGLVHSIAVDPMLIGNYGFQMAAALDNIEALEGFVSQITSGNKLCCTCLES 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01951 314 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 69 84 IPR004827 GO:0003700|GO:0006355
Arst4g01951 314 SMART brlzneu 61 122 IPR004827 GO:0003700|GO:0006355
Arst4g01951 314 Pfam Seed dormancy control 154 227 IPR025422 GO:0006351|GO:0043565
Arst4g01951 314 Gene3D - 65 113 - -
Arst4g01951 314 Pfam bZIP transcription factor 65 95 IPR004827 GO:0003700|GO:0006355
Arst4g01951 314 PANTHER TRANSCRIPTION FACTOR TGA9 1 300 - -
Arst4g01951 314 CDD bZIP_HBP1b-like 66 118 - -
Arst4g01951 314 ProSiteProfiles DOG1 domain profile. 135 314 IPR025422 GO:0006351|GO:0043565
Arst4g01951 314 Coils Coil 85 112 - -
Arst4g01951 314 SUPERFAMILY Leucine zipper domain 66 100 IPR046347 GO:0003700|GO:0006355
Arst4g01951 314 FunFam BZIP family transcription factor 65 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01951 Arst-Chr4 43876314 43884505 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01951 1 300 Calmodulin-binding Proteins AT1G77920 52.077 2.84e-106 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst4g01951 DOG1 2.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01951 K14431 - gmx:100775882 433.721