Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01950 ATGGGAATATATGATCCGTTCCATCAAGTTAGCATGTGGAGTGACAGCTTCAAAGTTGATGGCAGCCTGAATTCAGTTGCTTCCCCAATGTTAATGGTGAACACAAATATGGAGGAAAGTAAGCCTGAGTTTATTCCTCATGAATCAGGGGATCCTTCCGGAGATGATCAAGAGATTACTGATAAAGAAGTCCGTAAGGTGAATCGACGACTGGCACAAAATCGTGAGGCTGCACGGAAAAGCCGGCTGCGGAAGAAGGCTTATGTTCAACAATTAGAAACAAGCAGATTGAAGCTCATGCAATTGGAGCTGGAGATAGAGAAAGCAAGAAAACATGGTCTATATGTAGGGAGTGCATTAGATGATGGTTATACTGGCTCACCGGGAACAATAACCTCAGGGTTAACGGTGTTTGAGATTGAATATGGACACTGGGTTGAACAACAGCATCGGCAGAACGATGAACTCAGAAATGCATTGCACACTCATGCATCTGATATAGAGCTTCATCTACTTGTTGAGAGCAACTTGAATCATTATGCAAATCTTTTCCAGATGAAAGCAGATATGGCAAAGATTGATGTATTTTATTTGATCTCTGGTGCGTGGAAAGCATCGGTTGAACGCCTTTTTCTTTGGATTGGAGGATCCCGTCCATCGCACCTTCTAAATATCATAGTGCCACAACTTGAGCCTTTGAGCGATCAACAAGTCGCCAGTATTAACAACCTCCGTCTATCGTCCCAGCAAGCAGAAGATGCGCTTTCACTGGGGTTGGAGAAACTACAGCAGGGTCTGGTCCACAGCATAGCAGTTGATCCAATGCTTATAGGAAACTATGGATTTCAGATGGCTGCCGCCCTTGACAATATTGAGGCTCTAGAAGGTTTTGTGAGCCAGGCAGATCACCTCAGGCAACAAACTCTGCTGCACATGTCTCGAATCTTGACGACCGGCCAAGCCGCTCGAGGTTTGATGATAATGGGAGAATACTTACAACGCCTTCGCACTCTTAGCTCTTTATGGTCATCTCGTCCTTGA 1041 0.4486 MGIYDPFHQVSMWSDSFKVDGSLNSVASPMLMVNTNMEESKPEFIPHESGDPSGDDQEITDKEVRKVNRRLAQNREAARKSRLRKKAYVQQLETSRLKLMQLELEIEKARKHGLYVGSALDDGYTGSPGTITSGLTVFEIEYGHWVEQQHRQNDELRNALHTHASDIELHLLVESNLNHYANLFQMKADMAKIDVFYLISGAWKASVERLFLWIGGSRPSHLLNIIVPQLEPLSDQQVASINNLRLSSQQAEDALSLGLEKLQQGLVHSIAVDPMLIGNYGFQMAAALDNIEALEGFVSQADHLRQQTLLHMSRILTTGQAARGLMIMGEYLQRLRTLSSLWSSRP 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01950 346 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 69 84 IPR004827 GO:0003700|GO:0006355
Arst4g01950 346 SMART brlzneu 61 122 IPR004827 GO:0003700|GO:0006355
Arst4g01950 346 FunFam BZIP family transcription factor 65 114 - -
Arst4g01950 346 PANTHER TRANSCRIPTION FACTOR TGA9 1 346 - -
Arst4g01950 346 SUPERFAMILY Leucine zipper domain 66 100 IPR046347 GO:0003700|GO:0006355
Arst4g01950 346 Gene3D - 65 113 - -
Arst4g01950 346 Pfam Seed dormancy control 154 227 IPR025422 GO:0006351|GO:0043565
Arst4g01950 346 Pfam bZIP transcription factor 65 95 IPR004827 GO:0003700|GO:0006355
Arst4g01950 346 ProSiteProfiles DOG1 domain profile. 135 345 IPR025422 GO:0006351|GO:0043565
Arst4g01950 346 Coils Coil 85 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01950 Arst-Chr4 43876240 43884502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01950 1 346 Calmodulin-binding Proteins AT1G77920 54.596 3.05e-133 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst4g01950 DOG1 3.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01950 K14431 - gmx:100775882 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01950 4 43876240 43884502 Arst4g01950 4 43876240 43884502 ECH