Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01914 ATGGAGAATTATCGTGATGGAGTTGATGAAGGGGGTGATCTGGATTTTATAGATTTCACGAGCTTGATCAAGAATCTTGAGGATTTGATAAAAGGTGATGATACATTAGTCCCAGTGTTTGATTATCAGCAAAAGAGACGTGTTGGCTATAAAGCTATAAAGAGTACTGCATCTGGGGTGATAATAGTTGATGGAACATATGCATTACATGCAAAACTGCGTTCTTTACTGGATATTCGAGTTGCTGTGGTTGGCGGTGTTCATTTTAGTCTGCTTTCTAAAGTTCGCTATGACATTGGAGATTCTTGTTCACTGGATAGCCTTATAGACAGCATTTTTCCATTATTTAGGAAGCATATTGAGCCAGATCTTCATCATGCACAGATCAGAATTAACAACAGTTTTGTATCATCATTTAGAGAGGCAATCTACAAGGTTAAATGCAGAAGTGAGTCTCCAGAGGGATATTCAAGTACTGCCTTTCAAGGGAATGAAGCCCAAACAGATAATTGTATTGAAATGTACCTTAGACCACCTTCCACTAGTGAAGAAGCAAGGATAAATGATTGGATCAAAGTGCGGCAGTCTGGAATTAGATATTATTTATCACTTGGTGACCAGAGGATTGTTGACAAAAATTTTATTATCAGGCCTAAAGCAGAGTTTGAGGTTGGACGAATGACATTGGGTGGATTGTTGGCTCTTGGATACACAGTTGTCGTTAGTTATAAACGCTCATCCACAACTGTTGATAATGGCAAGGTTTTGGTGTCTTTTGAAACCATTGATGCCCTTGATGAGACATTCATGGTGATGAGAGGAACTAATAGGAAGACTGTTGGAACAGAAGCAATGAGGCTTGGTATCAATGGACCTTGGATTACTAAATCATATCTTGAAATGATCCTTGATAAAAAAGGTGTTCCTCGTCTTAGTACACCACCACTGGTGACTAATACATCTGTGCCTGGAAGTCAAGACACTGCAATCATTGCACCAAAACCAATTCGCGTGACTCCTGACCTTGTTACGGGATTGGAGGATTTGTCTCAGCCATGGACTCGGTCCCCTACAAAATCTAAAATGGAACCTGTTATGGCAACATGGCATTTCATATCTTCGGATTGTTCCCACCCTGACAACTCAGTCCTAGATCCTTCATCTTTCAGGGATACCATTAGGCTTGCTCCAATGCCTGAGTCATGTGACCTGGATAGGGGATTGCTTTTGGCTGTTCAAGCCATACAAGCTTTGTTGGAAAATAAAGGTTTCCCAGTCATAGTTGGAATTGGAGGTCCAAGTGGTTCTGGAAAGACTAGTTTGGCTCATAAAATGGCGAATATTATTGGATGTGAAGTGGTATCCCTGGAAAGCTATTATAAACAAGTAAAGGATTTCAAATATGATGACTTCAGCTCTCTTGACTTATCTTTGCTATCAAAGAATATTAGTGACATAAGAAAAGGCCGAAGAACAAAAGTACCAATATTTGACTTGGAAAGTGGTGCTCGGAGTGGCTTCAAGGAACTTGAAGTTTCAGAAGATTGTGGAGTGATAATTTTTGAAGGTGTCTATGCTTTGCATCCTGATATCCGAGTATCACTTGATTTTTGGATTGCTGTTGTAGGAGGAGTTCATTCACATTTGCTTTCACGAGTTCAAAGGGATAAGAGTAGAGTGGGTTGTTTTATTTCCCAGAATGAGATCATGATGACGGTGTTTCCAATGTTCCAGCAGTACATTGAACCTCATCTCGTTCATGCACACCTTAAAATTCGAAATGACTTTGATCCTGTGCTTTCTCCTGAGAGTTCATTGTTTGTGTTGAAGAGTAACAAGAAAGTAGCATATCAAGATATTCTTGCAATTCTTGACCGAGCAAAATTTTGCAGTTCTGTTCAGAAATTTATTGATATTTATATAAGGCTGCCTGGGATCCCTTCTAATGGGCAGTTGACAGAAAGTGATTGTATTCGAGTCAGAATATGTGAAGGAAGATTTGCCTTGCTGATACGTGAGCCTATTAGAGAAGGAAACTTCATCATTCAGCCTAAAGTGGATTTTGATATTGGCATTAGTACAGTTGCTGGTCTTCTTAATCTTGGGTATCAGGCAGTTGCTTACATTGAAGCCTCTGCATTCATCTATCAGGATGGAAAGATTCTAATTGAGGTTGATCATCTACAAGATGTCCCTGGCCCATATATTCAGATCAAGGGTGTTAATAAAGATGCAGTGGCAGCAGCGGGTTCAATGCTTGAATTGGATGGCTCATATACAACTAAGAGTTATCTTGAAATAATTTTAGAAAGACTACCAACAATAGAAAGAACTTCTGGTGGGATTAACTCTCAGCAATCAGCAAGGCTGCTAGAGATTATTGAATTTATTCAATCTCAGGGGTGCAGCTCTCCTTCAGAATCATCACCAAGTAGGGGAGTCTCTCCAATTGAAGGGGCTATTGAGGAGATGCAATCAAGGATTAGAAGGCTTGAGAAGTGGCTTGCTATAAATACGGTTCTATGGACATTTCTAATGTCTGCCCTTGTTGGTTTTTCACTGTATCAAAGGAGGCGTCAGTGA 2583 0.3988 MENYRDGVDEGGDLDFIDFTSLIKNLEDLIKGDDTLVPVFDYQQKRRVGYKAIKSTASGVIIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDSLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESPEGYSSTAFQGNEAQTDNCIEMYLRPPSTSEEARINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYTVVVSYKRSSTTVDNGKVLVSFETIDALDETFMVMRGTNRKTVGTEAMRLGINGPWITKSYLEMILDKKGVPRLSTPPLVTNTSVPGSQDTAIIAPKPIRVTPDLVTGLEDLSQPWTRSPTKSKMEPVMATWHFISSDCSHPDNSVLDPSSFRDTIRLAPMPESCDLDRGLLLAVQAIQALLENKGFPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKQVKDFKYDDFSSLDLSLLSKNISDIRKGRRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRVSLDFWIAVVGGVHSHLLSRVQRDKSRVGCFISQNEIMMTVFPMFQQYIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDILAILDRAKFCSSVQKFIDIYIRLPGIPSNGQLTESDCIRVRICEGRFALLIREPIREGNFIIQPKVDFDIGISTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVPGPYIQIKGVNKDAVAAAGSMLELDGSYTTKSYLEIILERLPTIERTSGGINSQQSARLLEIIEFIQSQGCSSPSESSPSRGVSPIEGAIEEMQSRIRRLEKWLAINTVLWTFLMSALVGFSLYQRRRQ 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01914 860 Pfam Phosphoribulokinase / Uridine kinase family 427 592 IPR006083 GO:0005524|GO:0016301
Arst4g01914 860 PRINTS Uridine kinase signature 546 556 - -
Arst4g01914 860 PRINTS Uridine kinase signature 452 463 - -
Arst4g01914 860 PRINTS Uridine kinase signature 425 442 - -
Arst4g01914 860 SMART AAA_5 424 568 IPR003593 GO:0016887
Arst4g01914 860 CDD UMPK_like 1 134 - -
Arst4g01914 860 Gene3D - 2 150 IPR027417 -
Arst4g01914 860 SUPERFAMILY CYTH-like phosphatases 623 767 IPR033469 -
Arst4g01914 860 CDD UMPK_like 427 595 - -
Arst4g01914 860 Gene3D - 424 601 IPR027417 -
Arst4g01914 860 Gene3D - 611 772 - -
Arst4g01914 860 PANTHER URIDINE KINASE 1 173 - -
Arst4g01914 860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 419 595 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01914 Arst-Chr4 37769854 37782652 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01914 420 583 PRT Gene Family AT1G55810 26.404 8.95e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01914 - - gmx:100778905 1486.09