Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01913 ATGGATGATGAAGTTATTCAGCGAGTGTTCCACGAAGGAGGACGCGATTTCTACCAGCAGCAACCTTCAACTTCCTCCATCCTTCAATCTCTCCCTCTCCATGTGTCTTTTGATCATGGCTATTATTTACTGGTAAAATCTATCCAAGAACTACGTGAGAAAAAGGAAGGCCTTGTTACAGTTGGAATTGGTGGTCCTAGTGGCTCTGGAAAAACAAGCTTAGCAGAAAAGGTGGCATCCGTTATTGGTTGTACTGTTATATCAATGGAGAATTATCGTGATGGAGTTGATGAAGGGGGTGATCTGGATTTTATAGATTTCACGAGCTTGATCAAGAATCTTGAGGATTTGATAAAAGGTGATGATACATTAGTCCCAGTGTTTGATTATCAGCAAAAGAGACGTGTTGGCTATAAAGCTATAAAGAGTACTGCATCTGGGGTGATAATAGTTGATGGAACATATGCATTACATGCAAAACTGCGTTCTTTACTGGATATTCGAGTTGCTGTGGTTGGCGGTGTTCATTTTAGTCTGCTTTCTAAAGTTCGCTATGACATTGGAGATTCTTGTTCACTGGATAGCCTTATAGACAGCATTTTTCCATTATTTAGGAAGCATATTGAGCCAGATCTTCATCATGCACAGATCAGAATTAACAACAGTTTTGTATCATCATTTAGAGAGGCAATCTACAAGGTTAAATGCAGAAGTGAGTCTCCAGAGGGATATTCAAGTACTGCCTTTCAAGGGAATGAAGCCCAAACAGATAATTGTATTGAAATGTACCTTAGACCACCTTCCACTAGTGAAGAAGCAAGGATAAATGATTGGATCAAAGTGCGGCAGTCTGGAATTAGATATTATTTATCACTTGGTGACCAGAGGATTGTTGACAAAAATTTTATTATCAGGCCTAAAGCAGAGTTTGAGGTTGGACGAATGACATTGGGTGGATTGTTGGCTCTTGGATACACAGTTGTCGTTAGTTATAAACGCTCATCCACAACTGTTGATAATGGCAAGGTTTTGGTGTCTTTTGAAACCATTGATGCCCTTGATGAGACATTCATGGTGATGAGAGGAACTAATAGGAAGACTGTTGGAACAGAAGCAATGAGGCTTGGTATCAATGGACCTTGGATTACTAAATCATATCTTGAAATGATCCTTGATAAAAAAGGTGTTCCTCGTCTTAGTACACCACCACTGGTGACTAATACATCTGTGCCTGGAAGTCAAGACACTGCAATCATTGCACCAAAACCAATTCGCGTGACTCCTGACCTTGTTACGGGATTGGAGGATTTGTCTCAGCCATGGACTCGGTCCCCTACAAAATCTAAAATGGAACCTGTTATGGCAACATGGCATTTCATATCTTCGGATTGTTCCCACCCTGACAACTCAGTCCTAGATCCTTCATCTTTCAGGGATACCATTAGGCTTGCTCCAATGCCTGAGTCATGTGACCTGGATAGGGGATTGCTTTTGGCTGTTCAAGCCATACAAGCTTTGTTGGAAAATAAAGGTTTCCCAGTCATAGTTGGAATTGGAGGTCCAAGTGGTTCTGGAAAGACTAGTTTGGCTCATAAAATGGCGAATATTATTGGATGTGAAGTGGTATCCCTGGAAAGCTATTATAAACAAGTAAAGGATTTCAAATATGATGACTTCAGCTCTCTTGACTTATCTTTGCTATCAAAGAATATTAGTGACATAAGAAAAGGCCGAAGAACAAAAGTACCAATATTTGACTTGGAAAGTGGTGCTCGGAGTGGCTTCAAGGAACTTGAAGTTTCAGAAGATTGTGGAGTGATAATTTTTGAAGGTGTCTATGCTTTGCATCCTGATATCCGAGTATCACTTGATTTTTGGATTGCTGTTGTAGGAGGAGTTCATTCACATTTGCTTTCACGAGTTCAAAGGGATAAGAGTAGAGTGGGTTGTTTTATTTCCCAGAATGAGATCATGATGACGGTGTTTCCAATGTTCCAGCAGTACATTGAACCTCATCTCGTTCATGCACACCTTAAAATTCGAAATGACTTTGATCCTGTGCTTTCTCCTGAGAGTTCATTGTTTGTGTTGAAGAGTAACAAGAAAGTAGCATATCAAGATATTCTTGCAATTCTTGACCGAGCAAAATTTTGCAGTTCTGTTCAGAAATTTATTGATATTTATATAAGGCTGCCTGGGATCCCTTCTAATGGGCAGTTGACAGAAAGTGATTGTATTCGAGTCAGAATATGTGAAGGAAGATTTGCCTTGCTGATACGTGAGCCTATTAGAGAAGGAAACTTCATCATTCAGCCTAAAGTGGATTTTGATATTGGCATTAGTACAGTTGCTGGTCTTCTTAATCTTGGGTATCAGGCAGTTGCTTACATTGAAGCCTCTGCATTCATCTATCAGGATGGAAAGATTCTAATTGAGGTTGATCATCTACAAGATGTCCCTGGCCCATATATTCAGATCAAGGGTGTTAATAAAGATGCAGTGGCAGCAGCGGGTTCAATGCTTGAATTGGATGGCTCATATACAACTAAGAGTTATCTTGAAATAATTTTAGAAAGACTACCAACAATAGAAAGAACTTCTGGTGGGATTAACTCTCAGCAATCAGCAAGGCTGCTAGAGATTATTGAATTTATTCAATCTCAGGGGTGCAGCTCTCCTTCAGAATCATCACCAAGTAGGGGAGTCTCTCCAATTGAAGGGGCTATTGAGGAGATGCAATCAAGGATTAGAAGGCTTGAGAAGTGGCTTGCTATAAATACGGTTCTATGGACATTTCTAATGTCTGCCCTTGTTGGTTTTTCACTGTATCAAAGGAGGCGTCAGTGA 2847 0.4015 MDDEVIQRVFHEGGRDFYQQQPSTSSILQSLPLHVSFDHGYYLLVKSIQELREKKEGLVTVGIGGPSGSGKTSLAEKVASVIGCTVISMENYRDGVDEGGDLDFIDFTSLIKNLEDLIKGDDTLVPVFDYQQKRRVGYKAIKSTASGVIIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDSLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESPEGYSSTAFQGNEAQTDNCIEMYLRPPSTSEEARINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYTVVVSYKRSSTTVDNGKVLVSFETIDALDETFMVMRGTNRKTVGTEAMRLGINGPWITKSYLEMILDKKGVPRLSTPPLVTNTSVPGSQDTAIIAPKPIRVTPDLVTGLEDLSQPWTRSPTKSKMEPVMATWHFISSDCSHPDNSVLDPSSFRDTIRLAPMPESCDLDRGLLLAVQAIQALLENKGFPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKQVKDFKYDDFSSLDLSLLSKNISDIRKGRRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRVSLDFWIAVVGGVHSHLLSRVQRDKSRVGCFISQNEIMMTVFPMFQQYIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDILAILDRAKFCSSVQKFIDIYIRLPGIPSNGQLTESDCIRVRICEGRFALLIREPIREGNFIIQPKVDFDIGISTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVPGPYIQIKGVNKDAVAAAGSMLELDGSYTTKSYLEIILERLPTIERTSGGINSQQSARLLEIIEFIQSQGCSSPSESSPSRGVSPIEGAIEEMQSRIRRLEKWLAINTVLWTFLMSALVGFSLYQRRRQ 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01913 948 Pfam Phosphoribulokinase / Uridine kinase family 515 680 IPR006083 GO:0005524|GO:0016301
Arst4g01913 948 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 507 683 IPR027417 -
Arst4g01913 948 PANTHER URIDINE KINASE 492 883 - -
Arst4g01913 948 Gene3D - 699 860 - -
Arst4g01913 948 SMART AAA_5 57 207 IPR003593 GO:0016887
Arst4g01913 948 SMART AAA_5 512 656 IPR003593 GO:0016887
Arst4g01913 948 CDD UMPK_like 60 222 - -
Arst4g01913 948 Gene3D - 512 689 IPR027417 -
Arst4g01913 948 Gene3D - 59 238 IPR027417 -
Arst4g01913 948 CDD UMPK_like 515 683 - -
Arst4g01913 948 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 171 IPR027417 -
Arst4g01913 948 SUPERFAMILY CYTH-like phosphatases 711 855 IPR033469 -
Arst4g01913 948 PRINTS Uridine kinase signature 634 644 - -
Arst4g01913 948 PRINTS Uridine kinase signature 513 530 - -
Arst4g01913 948 PRINTS Uridine kinase signature 540 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01913 Arst-Chr4 37769854 37783251 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01913 508 671 PRT Gene Family AT1G55810 26.404 8.05e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01913 - - gmx:100778905 1646.33