Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01882 ATGGAGAACATTCTGGGTCTCATCAAATTACGCATCAAAAGAGGCACTAACCTCAAACCTTGTGATAGTGATTCCAGTGACCCTTATGTCCTTGTCACCTTGGAGGAAACGAAACTGAAAACTCGTCATGAGAAAGATAGCTTGAATCCTGAGTGGAATGAAGAATTGACACTCTATATTAAGGATGTTAATATTCCCATTCATCTTACGGTTTGTGACAAAGACACTTTCACGAAGGACGACAAGATGGGCGAAGCGGATATCGACTTGAAGCCATATCTTCTGTGTGTGAAGGTGGGATTAAGCGAGCTGCCAGAGGGCCATGTGGTGAAGAGGATTGAACCAAATGACTCTAACTGCCTTGCTGAAGAGAGCAAGATCATATGGACTAATGGGAAAGTAATCCAATATATGACCTTAAAATTGAGAAATGTTAACACTGGTGAGCTTCATGTGGAAATTGAGTGGCTTGATGTTCCTGAATCCAAGGGCTTATCTGGGGTTCCACTTTAG 513 0.423 MENILGLIKLRIKRGTNLKPCDSDSSDPYVLVTLEETKLKTRHEKDSLNPEWNEELTLYIKDVNIPIHLTVCDKDTFTKDDKMGEADIDLKPYLLCVKVGLSELPEGHVVKRIEPNDSNCLAEESKIIWTNGKVIQYMTLKLRNVNTGELHVEIEWLDVPESKGLSGVPL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01882 170 SMART C2_3c 7 102 IPR000008 -
Arst4g01882 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 158 IPR035892 -
Arst4g01882 170 Pfam C2 domain 7 92 IPR000008 -
Arst4g01882 170 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Arst4g01882 170 Gene3D C2 domain 5 165 IPR035892 -
Arst4g01882 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 163 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01882 Arst-Chr4 35894259 35895891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01882 38 166 C2H2 Transcription Factor Family AT1G70790 54.198 1.40e-45 145