Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01842 ATGCTTGTTAGTAGCGGCAATAGCCAAAGACACAGACAAATCTCATGTCCACCAAGAATGGCTTACCGGACACTGCCATCTATGGCTGCTTCATCGTCATCTTCGTCTTCCAAAAAACATGATGTTTTTATCAGTTTTAGAGGCGAGGACACACGCAACAACTTCACAAGCCATCTTTGTGCTGCTCTTAACCAAAGCAAGATACAAGTCTTCATAGACAACAGAATTTCCAAGGGAGATGAGAACTCTTCCTCAATCTTCAAAGCCATAAGGGATTCCAATGTGTCCGTGGTTGTTCTGTCAAAGGACTACGCTTCCTCGACGTGGTGCATGCGTGAACTCACAAAAATACTCGAGCAAAAGAGACATGGTAAGGGCCACATTGTGGTACCTGTGTTCTATAAGATTGACCCTTCACATGTTAGGAAGCAAATTGGCACTTACAAGAAAGCATTTGAGAAACATGAGAGAGATGTCAAACACAACATTCTGCTGAAATGGAAAGCTGCTCTCACTGAAGTAGCCAATTTAGTTGGGTGGGATTCACAGAATTACAGGATCGAATCTGAACTCGTTGAGGAAGTTGTCAAAGATGTTATGCAAAAACTGAATTGCATATATCCCCCTGAAGTGAAAGATCTTGTTGGAATTGACCAAAATCTTGCTCCCATTAAATCCTTGTTGAGAATCAGGTTAAGAGAAGTTCGAATAATAGGAATTTGGGGCATGGGCGGAATAGGTAAAACAACCATTGCCAAAGCCTTGTTTTCCAAACTATCTTCTCAATATGAAGGTAGCTGCTTCTTGGAGAATGTAAGGGAAGAATCAGAACAGCATTTGCTGAATAAACTTCTTTCTGAGGTACTAGAGGATGCAAATCACTATTTCGGCACACCTATAGCAAGATCCACCTTTGTTATGAGGAGGCTTAGCCGAAAAAAGGTGTTAATAGTGCTTGATGATGTTGACAATCTGAAGAAGCTCGAAGATCTTGCTGCAAAACATAATTTCTTGGGACCAGGCAGTAGAGTCATTGTCACGACTAGAGATAAGCATGTCCTTAGCAAAGGGGTCGATGAAATATACGAGGTCAAAGGATTGCCCCTTCATCATGCTATTCAGCTTTTTAGCTTAAATGCCTTTGACAAAAGCTATCCTGAATCAGGTTTTGTGATGCTATCTAAAATGGTGGTTGATTATGCAAATGGCAATCCATTGGCTTTAAAAGTTTTAGGCTCATTCCTTCATTCTAGAAATCTGCAACAATGGAACAGTGCTCTGAGAAAACTCACAAAATTTCCAAATACAGAGATTCAGAATGTGTTGAGGTGGAGTTATGATGGATTAGATGATGATGAACAGAAGAATATGTTTCTGGACATTGCATGCTTTTTCCAAGGAGAGAAGAAAGAAACTGTTACACGGCTACTTGATATTTGTGGTTTCTATGCAGATATTGGGATAAGAATCCTGCAGGACAAAGCTCTAATAACATTTTCAGATGCAAATGAATTACACATGCATGATTTGATACAAGAAATGGGTTTGGAAATTGTTCGTCAGGAATCAACCAAAGACCCTGGAAGGCGCAGCCGGTTGTGGGATCCCGAGGAAATCTATGATTTACTGAAAAATGATAGGGGAAGTGATGCAGTTGAAGGCATAATGTTAGATGTGTCTCAAATAAGAGTCTTGAACTTGAGCTATGAGAGCTTCTCAAGGATGACCAGTCTAAGATTCATCAAATTCTATATGGGTAGGGGTAGGACATGCAATCTGTTCCTTCTTTCAGGTCTTGAATCATTGTCTAGTAAATTGAGGTACCTCCAATGGGATGGATACCCTTCCAAGTCTTTGCCATCGACCTTTTCTCCAGACAACCTTGTTGTGCTTTCCATGATGGGAAGCCATGTTGAAAAACTATGGGATGGAGTTAAGAGTCTTCCAAGCTTGAAAGAGATCAACCTTCGCGCCTGCAGCAATTTAACCAATCTCCCCGACTTATCTCTAGCGCCAAATCTTGAAAGGGTAGATCTTTCTCTTTGTACAAGTCTGCTTTGTGTTCCCACATCTATCAAGTATACCAACAAACTTCTTTTGTTTAACCTGGAATCCTGCAAAAATCTGAAGAGTCTTCCAAGAAACATTCACTTATTTTCTCTTCAAATGTTCATTCTCAAAGGCTGCTCAAGTCTTGATGAGTTTTCATTGACTTCAGAGAACATGACACGCCTGGACTTAAGAGGGACGGATATTGAACATTTTCCAGAATCACTTTGGCAACTTCTTAACCAGCTGGTTTACTTGAATCTGGAATCCTGTGCTAAGCTTAAGAGTCTCACAAGCAACATTCACTTGGTATCTCTACAAAGGCTCAATCTTAGAGATTGTTCAAGCCTTGAAGTTTTCTCTGTGACTTCAGAGAACATGGAATACCTGAATTTGGGAGGAACATCAATCAAAGGATTGCCAACATCAATTTGGCGAAACAATAAGCTTTTTACTTTGGTTCTTCATTCCTGTAAAAGACTTGTGAATTTTCCAGACAAGCCGAAACTTGGTGAATTGTCTCTTACTTTCAATGAGAAAAACTCTTTTGAAGGTCCAACTGTGGATGAACCATGGAATTTGTCATCCTTATCAGATTTATCACTGAAAGGAAGCGGTATTGTGAACTTACCTGCAAGCATCAAAGATCTTCCAAGACTGAAAAAACTTACCTTGATGGATTGCAAGAAGCTTTGGTCTCTACCAAGCCTTCCATCATCTTTGGAAGACTTATCCCTTGATGAAAGAAATATTGATTTTTTACCTGTAAATATCAAAGATCTTTCTCATTTGAAAAAGCTTACCATAATTAACAAGAAGAGGCAGTTTTCTCCACCGGAGCTTCCACCATCCTTGAAAGATATATTCCTAAATGAAAGTAAAGTTGATTCCTTGCTTCTGAGCATGAAAGATCTTTCTCATCCACAAAAGTTTCCTCTGATAAAGTGTAACTGGCTTCATCCTCTACTTGAGTTTCCGCCATGTTTGGAAGATTTATCAATAAATGAAAGCAATATTGAGTGCCTGCCAGTTAGCATAAAAGATCTTTCTCACCTGAGAAAACTATCCTTAATAGAGTGCCAGAGGCTTCGGTACTTGCCAGAGCTTCCCCGATCTTTAGAACATCTGTCTGTAAATGGCTGTAACATTGAGAGCTTGCCAAGGAACATCAAAGATCTTTCTCATTTGCAAACCATTACCTTAGTCGATTGCAAGAGGCTCCGGTCTGTACCAGAACTTCCACCATGCCTGCAATCTTTTTGTGCAGCAGATTGCAGATCACTTGAGATTGTTCCAAGTTCAAAGACTATCTTGATGGAAGAGAGGATTGCCTTTTATTACAATTGCATAAACTTGGATCAGAATTCGCGCAACAACATCATTGCAGATGCCCCCTTCGAGGCAGCTTTTGCTTCCTTGAAAGAAAGAACACCTCTTGGTCCTTTGATATCCATATGTCTGCCAGGAATTGAAATCCCAGACTGGTTCAGCTACCAAACACCGAATTCTGCATTGAACATAGAAATTCCTCAACGGTGGTTCATTGATTCGAAGTTCTTAGGCTTTGCTCTATGCCTTGTAATTGGTGGTTCTCATCAAAACAGCAACGAAGGCTATGATCCAGATATTAATTGTTATCACTTTGTAAAGCCTGCTGGCAACTATGATCCCAATGATCGCTTTCTTGGACATTGCACAACTATAATGCAGGTGCCGTGGGGTTTCAATTCAGATCATATATTCATATGCTACTATCCAGCTTTCAATGTTCCCATCATGCAAGATTTCAAGGACTTAGCCAAGTACTATGATGCAAACAGCCTGAATCTCAGAGTCATTTTTAAATTTAAGGGTCCATCTCAAAGGTTGGACCTTGTGAAGAAGTGTGGAGTCAGACCACTATTGATTGCTAATACTAAAAGGTTTCACATTGAGACTTGA 3990 0.4005 MLVSSGNSQRHRQISCPPRMAYRTLPSMAASSSSSSSKKHDVFISFRGEDTRNNFTSHLCAALNQSKIQVFIDNRISKGDENSSSIFKAIRDSNVSVVVLSKDYASSTWCMRELTKILEQKRHGKGHIVVPVFYKIDPSHVRKQIGTYKKAFEKHERDVKHNILLKWKAALTEVANLVGWDSQNYRIESELVEEVVKDVMQKLNCIYPPEVKDLVGIDQNLAPIKSLLRIRLREVRIIGIWGMGGIGKTTIAKALFSKLSSQYEGSCFLENVREESEQHLLNKLLSEVLEDANHYFGTPIARSTFVMRRLSRKKVLIVLDDVDNLKKLEDLAAKHNFLGPGSRVIVTTRDKHVLSKGVDEIYEVKGLPLHHAIQLFSLNAFDKSYPESGFVMLSKMVVDYANGNPLALKVLGSFLHSRNLQQWNSALRKLTKFPNTEIQNVLRWSYDGLDDDEQKNMFLDIACFFQGEKKETVTRLLDICGFYADIGIRILQDKALITFSDANELHMHDLIQEMGLEIVRQESTKDPGRRSRLWDPEEIYDLLKNDRGSDAVEGIMLDVSQIRVLNLSYESFSRMTSLRFIKFYMGRGRTCNLFLLSGLESLSSKLRYLQWDGYPSKSLPSTFSPDNLVVLSMMGSHVEKLWDGVKSLPSLKEINLRACSNLTNLPDLSLAPNLERVDLSLCTSLLCVPTSIKYTNKLLLFNLESCKNLKSLPRNIHLFSLQMFILKGCSSLDEFSLTSENMTRLDLRGTDIEHFPESLWQLLNQLVYLNLESCAKLKSLTSNIHLVSLQRLNLRDCSSLEVFSVTSENMEYLNLGGTSIKGLPTSIWRNNKLFTLVLHSCKRLVNFPDKPKLGELSLTFNEKNSFEGPTVDEPWNLSSLSDLSLKGSGIVNLPASIKDLPRLKKLTLMDCKKLWSLPSLPSSLEDLSLDERNIDFLPVNIKDLSHLKKLTIINKKRQFSPPELPPSLKDIFLNESKVDSLLLSMKDLSHPQKFPLIKCNWLHPLLEFPPCLEDLSINESNIECLPVSIKDLSHLRKLSLIECQRLRYLPELPRSLEHLSVNGCNIESLPRNIKDLSHLQTITLVDCKRLRSVPELPPCLQSFCAADCRSLEIVPSSKTILMEERIAFYYNCINLDQNSRNNIIADAPFEAAFASLKERTPLGPLISICLPGIEIPDWFSYQTPNSALNIEIPQRWFIDSKFLGFALCLVIGGSHQNSNEGYDPDINCYHFVKPAGNYDPNDRFLGHCTTIMQVPWGFNSDHIFICYYPAFNVPIMQDFKDLAKYYDANSLNLRVIFKFKGPSQRLDLVKKCGVRPLLIANTKRFHIET 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01842 1329 SUPERFAMILY L domain-like 809 1095 - -
Arst4g01842 1329 FunFam Disease resistance protein RPS4 549 740 - -
Arst4g01842 1329 SMART till_3 39 177 IPR000157 GO:0007165
Arst4g01842 1329 Gene3D - 203 363 IPR027417 -
Arst4g01842 1329 Gene3D Ribonuclease Inhibitor 976 1136 IPR032675 -
Arst4g01842 1329 Pfam TIR domain 39 208 IPR000157 GO:0007165
Arst4g01842 1329 SUPERFAMILY Toll/Interleukin receptor TIR domain 30 180 IPR035897 -
Arst4g01842 1329 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 461 IPR027417 -
Arst4g01842 1329 Gene3D Ribonuclease Inhibitor 862 963 IPR032675 -
Arst4g01842 1329 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 40 736 IPR044974 GO:0006952
Arst4g01842 1329 Gene3D Ribonuclease Inhibitor 719 849 IPR032675 -
Arst4g01842 1329 Gene3D Ribonuclease Inhibitor 551 718 IPR032675 -
Arst4g01842 1329 PRINTS Disease resistance protein signature 646 662 - -
Arst4g01842 1329 PRINTS Disease resistance protein signature 309 323 - -
Arst4g01842 1329 PRINTS Disease resistance protein signature 237 252 - -
Arst4g01842 1329 PRINTS Disease resistance protein signature 401 415 - -
Arst4g01842 1329 FunFam Disease resistance protein (TIR-NBS-LRR class) 36 205 - -
Arst4g01842 1329 SUPERFAMILY L domain-like 508 849 - -
Arst4g01842 1329 Gene3D - 36 202 IPR035897 -
Arst4g01842 1329 Pfam C-JID domain 1170 1315 IPR045344 -
Arst4g01842 1329 Gene3D - 367 450 IPR042197 -
Arst4g01842 1329 ProSiteProfiles TIR domain profile. 38 203 IPR000157 GO:0007165
Arst4g01842 1329 Pfam Leucine Rich Repeat 627 646 IPR011713 -
Arst4g01842 1329 Pfam NB-ARC domain 233 439 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01842 Arst-Chr4 34827441 34832862 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01842 35 827 WRKY Transcription Factor Family AT4G12020 37.454 1.36e-126 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01842 - - adu:107484101 2602.39