Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01840 ATGGGGGGGGGGACAAATACACAAGGTAAACATGGTAAAGATCCTCGAGTTTGGAACAAAGAAGAGTATCAACGACTGAAGCTTGATTCTTTCTTTATCTTCGTCGATAACTTGCCGGAGGATATCTCAAAAAAGGAACTTTTTAATACATTCAAATGGACAGGTAGAATCATCGACATATACCTGTCGCGAAAGAATAAAAATGGGCACATATATCTATTTTCTTTTGTACGATACACTACAAAGGGAGGAGCATTGAAGGCTATTGCAGAGATGAAGGGTATGGTGGTGAGAGGTAAAAGATTGTTCGTCGGTGAAGCCAAATATAGAAGAGAAGCTGGGATGCAGATTATGAAAGATAAAGGAGTGAAGGTGGTCACCAGGCATAACACTGGAGGAAGCCAGCCACAAACAAAGAGTGGGGAAGTAGCTGCAGAGAAAGTGGCGAGGCAGCCGTCAAAGACACCAGCCAAAGATCAACATAGTAATGGATGGATTAAGAGATTAGAAGTACCGATAGCAAGTGAGAACGTCGTCTGGTTACAGAGAAGCATTGTCGGAGGTACAAAATCGGCAATTGATCTTAAGACACTGGAGTGA 600 0.425 MGGGTNTQGKHGKDPRVWNKEEYQRLKLDSFFIFVDNLPEDISKKELFNTFKWTGRIIDIYLSRKNKNGHIYLFSFVRYTTKGGALKAIAEMKGMVVRGKRLFVGEAKYRREAGMQIMKDKGVKVVTRHNTGGSQPQTKSGEVAAEKVARQPSKTPAKDQHSNGWIKRLEVPIASENVVWLQRSIVGGTKSAIDLKTLE 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01840 199 CDD RRM_SF 33 104 - -
Arst4g01840 199 SMART rrm1_1 32 105 IPR000504 GO:0003723
Arst4g01840 199 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 31 109 IPR000504 GO:0003723
Arst4g01840 199 MobiDBLite consensus disorder prediction 129 162 - -
Arst4g01840 199 Gene3D - 5 154 IPR012677 -
Arst4g01840 199 SUPERFAMILY RNA-binding domain, RBD 23 113 IPR035979 GO:0003676
Arst4g01840 199 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 30 120 - -
Arst4g01840 199 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 33 102 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01840 Arst-Chr4 34818376 34818975 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01840 33 112 Eukaryotic Initiation Factors Gene Family AT4G34110 33.750 1.06e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01840 - K13126 adu:107484100 404.06