Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01800 ATGGACAGAGGCGGTTATAATCAGAGACGTGGTGGTGGTAACGCCAGAGGCAACGGAAGAGGAGGCCGCATGAGAGGAAGAGCAAGAGGAAGAAACTTTTCCCAACCCCCACGGCAACCGGCTGACAGTGGCGTAGGAAGAGGCACCGCCGGCAGAGGATTTTATCCGCAGCCACCACCACCACAGTGGCAGCCAAGGCAGCAGAACACCATCTCCGGGGGCACATCAACCGCAACCGGCAGCGGAACCGCACCTCCAAGTCTCGTTTCCCCTCCGTCAAACCCTCCTCCTCCCACTCAAAAAGTTGTTCCGGTTGCCGGAATGGGAACGATTGGAACGTCTTCAGACTCCAATGAAACGATCTCACCCATTCAGAGGCCCGACGCCGGTGGCACGGTGGCGGTTAGGATCAAGACTCTTCAGGTGAACCATTTTCCAGTGAAATTCAACCCAGAGAGCAGGATCATGCACTACAATGTCGATGTGAGTCCCCAATCGCCGCCACAACCAGGCCGTCCACCGAGGAGGATATCAAAGACCGAACTGTCATTGATCCGTGACAAGTTGTTCCTTGACCATCCGGAGCTGCCGCTAGAGATGACTGCCTACGATGGTGAGAAGAACATTTTTAGCAAGGTTAGTTTGCCCGAAGAGGCTTTTGTGGTGGAAGTGTCCAAGGGAGAGGACGAGAGGCCCACAGGATTCAACGTGACGTTGACTCTAGTCAACATTCTTGAGATGAGTAGGTTGGAGGATTACATCAGAGGCAGGGCATTGTCAATCCCCAGAGTGATCTTGCAGGGTGTGGATGTGGTCTTCAAGGAGAATCCAACAAAATGTACTGTTCCGGTTGGTCGCTGCTTCTACCCAATGAACCCGAAATTTAGAGAGACGAATCTTCAGCCTGGTGTGATTGCTGTTGGAGGGTTTCAGCATAGTCTCAAACCAACCCGTCAAGGACTGTCATTGTGCTTGGATTATTCGGTTTTGTCTTTCAAGAAAAAAATGCCAGTGCTGGATTTCCTTCATCAACAGATTACCGGTTTCAATTTGCGCGAATTCGGAAGGTACAGAAAACATGTTGAAAATGTGCTAATTGGTTTGAAGGTTCATGTCACCCACCGGAGGACCAAACAGAATAACCCCACTGGGCAGCTTAACCTTGTTGGCTACTTCCACGATAGGTATCAGATTGATATCAGGTACAAGGACATCCCTGCATTGGATTTTGGAGGTAACAAGACCAACTATGTGCCAATGGAACTTTGTGTCTTGGTTGAGGGTCAGAGGTATCCCAAAGAGTATTTGAGTAAGGATGCTGCGAAGAATTTGAAAGATATGTGCCTGCCTCCACCGAGAGTGAGGCAAGCTGCAATACAGGATATGGTGAATTCAAGATGTGGACCCTGTGGGGGTGGTATCGTTGAAAATTTTGAAATGAATGTCAGCAATGCTATGACAACAGTGACTGGCCGTGTACTTGGACCCCCAAAACTGAAGCTTAGCGATCCAAGTGGCAGGACTATCCAGATGGCATTGACTCCAGAGAAGTGCCAATGGAATTTAGTTGAGAAGTCAATGTTTGAAGGTAAGTCAGTTGAGTGTTGGGGCATTCTTGATTTCACCTTCCGCAGTAAATGTATCTTTAGCGGTCAAAGATTCATTTCTAAGCTTATTGAGAAGTACGATAAATTTGGCATCATCATGAAGGAGCCAGTTTGGATAGAAAAAACAGACATGTTGAAACTTGGCAACTATAATCAGCTTTCTGACTTACTTGAAAAGATTAATGATGAGGTTTTCAGAAAATGTAGATGCCGGCTGCAATTTCTTCTGTGTGTAATGGCCTACAAAGATCCAGGTTACAAGTGCCTCAAGTGGATTGCTGAGACCAAGGTCGGCATTGTGACACAGTGCTGCTTGTCGGGTAATACTAATTCTGCAAAAGATCAATATCTTACTAATCTTGCTCTCAAGATCAATGCGAAAATTGGAGGCAGCAATGTGGAGCTTATTAATAGGCTTCCTCACTTTGAGGGCGATGGTCATGTTATGTTTATCGGGGCTGATGTAAATCATCCGGCTTCCAGAGATGCAAATAGTCCATCAATGGCTGCTGTGGTTGCCACTGTTAATTGGCCGGCTGCAAACCGCTATGCTGCTCGAGTTTGCGCTCAAGAGCATCGAACTGAGAAGATTTTGAACTTTGGAGAAGTTTGCCTTGAGCTTGTTTCATGTTATGAAAGGCTGAATGGAGCCAAGCCTGAAAAGATTGTTATCTTCCGTGATGGGGTCAGTGAAAGTCAATTTCAGATGGTTCTTGGTGAAGAGCTTCAGGATTTGAAGAGGACCTTTGAACGTGCAAATTACTCCCCAACCATTACTCTTATTGTGGCACAAAAGCGACACCAGACTCGACTCTTCCCTTCTCCTCCTGATAATGAGACGACGTCTGCTACTCGCGGCAATGTGTTGCCTGGAACAGTAGTGGATACAGTCATCATCCACCCCTTTGAGTTTGACTTTTATCTGGTTAGTCACCATGGAAGCCTGGGAACAAGCAAGCCCACTCATTACCATGTCTTGTGGGATGAGCACGATTTCACGTCAGATAAACTCCAGGAACTGATATATGACATGTGCTTTACGTTTGCGCGGTGCACGAAACCTGTGTCTTTAGTCCCTCCGGTGTACTATGCTGACCTTGCTGCATACAGAGGACGACAATACTATGAAGCAAAGATTGGGATGCAATCTCCGTATTCAGCTACATCTTCTTCATCATCACCTTTGGCTTCTTCATCCGTTTCTTCAGCTACTTCAAATTCGAATGATATGGACTTCTACAAGCTGCATTCTGATCTGGAAAATATAATGTTCTTCATCTAA 2889 0.4676 MDRGGYNQRRGGGNARGNGRGGRMRGRARGRNFSQPPRQPADSGVGRGTAGRGFYPQPPPPQWQPRQQNTISGGTSTATGSGTAPPSLVSPPSNPPPPTQKVVPVAGMGTIGTSSDSNETISPIQRPDAGGTVAVRIKTLQVNHFPVKFNPESRIMHYNVDVSPQSPPQPGRPPRRISKTELSLIRDKLFLDHPELPLEMTAYDGEKNIFSKVSLPEEAFVVEVSKGEDERPTGFNVTLTLVNILEMSRLEDYIRGRALSIPRVILQGVDVVFKENPTKCTVPVGRCFYPMNPKFRETNLQPGVIAVGGFQHSLKPTRQGLSLCLDYSVLSFKKKMPVLDFLHQQITGFNLREFGRYRKHVENVLIGLKVHVTHRRTKQKXNPTGQLNLVGYFHDRYQIDIRYKDIPALDFGGNKTNYVPMELCVLVEGQRYPKEYLSKDAAKNLKDMCLPPPRVRQAAIQDMVNSRCGPCGGGIVENFEMNVSNAMTTVTGRVLGPPKLKLSDPSGRTIQMALTPEKCQWNLVEKSMFEGKSVECWGILDFTFRSKCIFSGQRFISKLIEKYDKFGIIMKEPVWIEKTDMLKLGNYNQLSDLLEKINDEVFRKCRCRLQFLLCVMAYKDPGYKCLKWIAETKVGIVTQCCLSGNTNSAKDQYLTNLALKINAKIGGSNVELINRLPHFEGDGHVMFIGADVNHPASRDANSPSMAAVVATVNWPAANRYAARVCAQEHRTEKILNFGEVCLELVSCYERLNGAKPEKIVIFRDGVSESQFQMVLGEELQDLKRTFERANYSPTITLIVAQKRHQTRLFPSPPDNETTSATRGNVLPGTVVDTVIIHPFEFDFYLVSHHGSLGTSKPTHYHVLWDEHDFTSDKLQELIYDMCFTFARCTKPVSLVPPVYYADLAAYRGRQYYEAKIGMQSPYSATSSSSSPLASSSVSSATSNSNDMDFYKLHSDLENIMFFI 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01800 963 CDD PAZ_argonaute_like 336 427 - -
Arst4g01800 963 ProSiteProfiles Piwi domain profile. 611 913 IPR003165 GO:0003676
Arst4g01800 963 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 139 915 - -
Arst4g01800 963 Pfam Argonaute linker 1 domain 283 332 IPR014811 -
Arst4g01800 963 SMART DUF1785_2 282 335 IPR014811 -
Arst4g01800 963 MobiDBLite consensus disorder prediction 66 87 - -
Arst4g01800 963 SMART Piwi_a_2 611 913 IPR003165 GO:0003676
Arst4g01800 963 Gene3D - 494 673 - -
Arst4g01800 963 MobiDBLite consensus disorder prediction 1 127 - -
Arst4g01800 963 Pfam N-terminal domain of argonaute 139 272 IPR032474 -
Arst4g01800 963 SUPERFAMILY PAZ domain 332 465 IPR036085 GO:0005515
Arst4g01800 963 Pfam Piwi domain 612 912 IPR003165 GO:0003676
Arst4g01800 963 Pfam PAZ domain 386 440 IPR003100 GO:0005515
Arst4g01800 963 SUPERFAMILY Ribonuclease H-like 608 913 IPR012337 -
Arst4g01800 963 MobiDBLite consensus disorder prediction 110 125 - -
Arst4g01800 963 Gene3D - 681 963 IPR036397 GO:0003676
Arst4g01800 963 Gene3D paz domain 331 432 - -
Arst4g01800 963 CDD Piwi_ago-like 475 912 IPR045246 -
Arst4g01800 963 ProSiteProfiles PAZ domain profile. 385 428 IPR003100 GO:0005515
Arst4g01800 963 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01800 Arst-Chr4 31857521 31861974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01800 140 962 Eukaryotic Initiation Factors Gene Family AT1G48410 33.598 5.35e-139 441