Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01774 ATGGAGTTCGAGGTGAAGCTTGTTGCCGCCATCGACAATTGCTTCGTCTCCCTTCCCCTCCCTCTCATCCAAACTCTCCAATCCACGCGCTCCTCTCCTCTCCCTCACATACTCGCCCTCGACCTCTGGTTCGTCGCTTGGTCCGGCGCCACTTCTTCTTCTCCCTCCGCCATCGAGGTTTCGAAACAATTTGCGGAGTGCATTTCGTTGCCGAATCACGGTACTGTTCAGGTGAGAGCTGCTTCCAATGTGGCTCATGCTTCTCTTGTTACGATAGAGCCTCACACCGAGGATGATTGGGAGGTTTTGGAACTCAATTCCGAACAAGCTGAGGCTGCTATCCTCAACCAGGTCAGGATTGTTCATGAAGGGATGAGATTTCCTTTGTGGTTACATGGTCACACCGTCATCACATTCCATGTCACTTCTGTTTTCCCGAAGAAAGCGGTGGTACAACTCATGCCAGGAACTGAAGTTGCCGTTGCTCCCAAAAGGCGATCTAGATCCTGTGATAAGGAACAAACTGCAAAGATGCTTCTCCGTATACAAGATCCAGGGGTATTATGTCATACCAGAACTGATGTCAAAGGTGTTGAGCTCCATATGGGGCTCACTTCTGTTGTTTTTGTTCACCCAGAAACAGCCAAGCACTTCTCTTTTAACATGCTTCAGCCAGTTTCCTTAGTACCAAGAATATCCAAGGAGAATGCCAATATTTCGAAAACTAATGTTTTGAAATCCAAAGGCGGGTCACCTGGCAATGAAGTTGAGAATGGAAATTTAACTGACAAGAAACAACATCGACAAGCTGTTGTTCATCTCTTATTTTCAGAATCTGTGGCTGCAGGGCATGTGATGTTAGCCAAGTCTCTTCGCCTCTATTTGAGAGCTGGCCTACATACATGGGTTTATTTGAAAGCATATGATATCATTAGGGAGAAAAGTATTCCATCCATCACTTTTTCTCCTTGTCAATTCAAACTATTAAAGCAGGATAGTTCTGCTGAGAAAGATGGTCTGGATAGCCACAATAATCACATGAATGGAAAATTACTTGCGAAATCTATGTCAGGTGACTTTGTGGACCCTATAGATTGGTCAATTAACAATGAAGTTGTTGCAGCTCTTTCTGATGAATCCAACTGCAAAGCAGAGGAAGAGAATGCAAATCAGTCTCAGAATCAAAAGGGGATAAAGAGTCTTGTTCGGCTGTGGTATATTGCACAACTTGAGGCAATTACTTCTATTACGGGTGTAGAGGTTAATTCATTGGTCATGTGTAGCCAAACTTTGCTTGATTTCAAATTAAACTGTCACAACCTTGGGGATAATGGGAGAGCTCCCCTACCTTATAATTCTTCAGAGAATAGTGGCAAGACTGCTGAAGTGTTATTTATTTTGACTTTTGGTGATGAACATCTGCATCATGGGAAACCTAATGCATACAAAGTTGCTCTTGGTAAAAGCCTTAAAAGTATCAATATAGGCGATCTGCAGCTTTTTGAAGGGATGAAATTGGGTGATCCCGTGTCTATTCATTCTATTGAAGAGACAGCATCTCAAGAGCACATTAGTTCAAATGTATCTTTACTTAGCTGGATGGAGAAACCAGCTTCTGATATTATTAATCGGATGTTGGTATTGTTATCTTTGAAGTGTGGTCTGTGGTTTGGTTCATGCAACTTGCCACTCCCTGGACATGTTTTAGTACACGGACCACCAGGCTCTGGGAAAACTTCATTATCAAGGGCTGTAGCCAAATCCCTTGAGAATCATAAAGATATCTTAGCACACATAGTTTTTGTGCCCTGCTCAAAACTTTCTTTGGAGAAGGTCCCAATAATTCGCCAAGAACTTACAAACCATGTAATGGAAGCTTTAAACCATGCGCCCTCCATCGTAATCTTTGATAATCTTGATAGCATAATTTCAACTTCTGATTCCGAAGGATCTCAGCCCTCAACATCTGTTGCTGGACTCTCAGATATTTTGGTTAACATCATTGATGAATATAGGGAGAAGAGGCAAAAATCATGTGGATTTGGACCGGTCGCCTTCATAGCTTCCATACAGTCACTGGAGAAACTGCCACAGTCTTTGAGCTCTTCAGGACGCTTTGATTTCCACATACAGTTGCCAGCTCCTGCAGCTTCAGAGCGTAAAGCTATGTTGAAGCATGAAATTGAAAGGCGTCACTTGCAATGTGGTGAAGACATCCTACTGGATGTGGCTGTCAAATGTGATGGTTATGATGGCTATGATCTGGTATTCCAATTAGTCATTAATTCGTTATTTCCATGGTTTCACCTGCATTTCGCTGTTCATCGATTTTTGCCATCAAATGCTGCCAATAATGAGCACGAGAGTCCTGCTTTACTAAGAGAGGATTTCTCCCAGGCAATGCATGGTTTTCTTCCAGTTGCAATGCGTGACATCACAAAGTCTGCATCTGATGATGGTCGTTCTGGATGGGATGATGTGGGTGGCCTCGTTGACATCCGAAATGCTATTAAGGAGATGATAGAGTTGCCATCAAAGTTTCCAAAAACTTTTGCACAAGCACCATTGAGGTTGAGGTCAAACGTCCTTTTATATGGTCCTCCTGGTTGTGGCAAAACTCACATTGTGGGTGCTGCTGCGGCTGCTTCATCGCTTCGATTCATATCAGTGAAAGGACCAGAGCTGTTGAACAAGTATATTGGTGCTTCTGAACAAGCCGTTAGGGATATATTCTCTAAAGCAGCAGCAGCAGCTCCTTGCTTACTATTTTTTGATGAGTTTGATTCTATTGCTCCTAAGAGAGGGCATGACAATACTGGAGTAACTGATCGTGTCGTTAATCAATTTCTGACCGAGTTAGATGGTGTTGAGATTTTAACTGGTGTATTTGTATTTGCTGCTACAAGTAGACCGGATTTACTTGATGCGGCACTGCTGAGACCTGGTAGGTTAGATCGACTTCTTTTCTGTGATTTTCCATCTTGGCATGAGAGATTGGAAATTCTGACTGTTCTTTCTAGAAAGTTACCAATGGCGCATGATATAGATTTGGCCACAGTAGCTAAAATGACTGAGGGATTCAGTGGAGCTGACCTCCAAGCTCTCCTCTCAGATGCACAGCTCGCAGCAGTCCATGAAGTTCTGGACAATTTGGGTGCCTCTGCGCCGGGTAAAGCACCAGTTATTACAGATGCTTTACTGAAGGCCACTGCCTTGAAGGCTAGACCATCTGTTTCAGAAGAAGAGAAAAGGAGACTCTACAGTATCTATGGCCAGTTCCTGGATTCAAAGAGATCTGTTGCTGCTCAGTCAAGGGATGCCAAAGGCAAGAGAGCAACTCTAGCGTGA 3348 0.4349 MEFEVKLVAAIDNCFVSLPLPLIQTLQSTRSSPLPHILALDLWFVAWSGATSSSPSAIEVSKQFAECISLPNHGTVQVRAASNVAHASLVTIEPHTEDDWEVLELNSEQAEAAILNQVRIVHEGMRFPLWLHGHTVITFHVTSVFPKKAVVQLMPGTEVAVAPKRRSRXSCDKEQTAKMLLRIQDPGVLCHTRTDVKGVELHMGLTSVVFVHPETAKHFSFNMLQPVSLVPRISKENANISKTNVLKSKGGSPGNEVENGNLTDKKQHRQAVVHLLFSESVAAGHVMLAKSLRLYLRAGLHTWVYLKAYDIIREKSIPSITFSPCQFKLLKQDSSAEKDGLDSHNNHMNGKLLAKSMSGDFVDPIDWSINNEVVAALSDESNCKAEEENANQSQNQKGIKSLVRLWYIAQLEAITSITGVEVNSLVMCSQTLLDFKLNCHNLGDNGRAPLPYNSSENSGKTAEVLFILTFGDEHLHHGKPNAYKVALGKSLKSINIGDLQLFEGMKLGDPVSIHSIEETASQEHISSNVSLLSWMEKPASDIINRMLVLLSLKCGLWFGSCNLPLPGHVLVHGPPGSGKTSLSRAVAKSLENHKDILAHIVFVPCSKLSLEKVPIIRQELTNHVMEALNHAPSIVIFDNLDSIISTSDSEGSQPSTSVAGLSDILVNIIDEYREKRQKSCGFGPVAFIASIQSLEKLPQSLSSSGRFDFHIQLPAPAASERKAMLKHEIERRHLQCGEDILLDVAVKCDGYDGYDLVFQLVINSLFPWFHLHFAVHRFLPSNAANNEHESPALLREDFSQAMHGFLPVAMRDITKSASDDGRSGWDDVGGLVDIRNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPMAHDIDLATVAKMTEGFSGADLQALLSDAQLAAVHEVLDNLGASAPGKAPVITDALLKATALKARPSVSEEEKRRLYSIYGQFLDSKRSVAAQSRDAKGKRATLA 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01774 1116 FunFam Peroxisome biogenesis factor 1 85 164 - -
Arst4g01774 1116 Pfam AAA+ lid domain 1015 1051 IPR041569 -
Arst4g01774 1116 Gene3D - 994 1073 - -
Arst4g01774 1116 MobiDBLite consensus disorder prediction 244 264 - -
Arst4g01774 1116 CDD RecA-like_PEX1_r2 834 991 - -
Arst4g01774 1116 Pfam Peroxisome biogenesis factor 1, N-terminal 90 163 IPR015342 GO:0005524|GO:0005777|GO:0007031
Arst4g01774 1116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 549 759 IPR027417 -
Arst4g01774 1116 ProSitePatterns AAA-protein family signature. 963 981 IPR003960 GO:0005524|GO:0016887
Arst4g01774 1116 Gene3D - 519 737 IPR027417 -
Arst4g01774 1116 PANTHER AAA-FAMILY ATPASE 213 1089 - -
Arst4g01774 1116 Pfam ATPase family associated with various cellular activities (AAA) 863 990 IPR003959 GO:0005524|GO:0016887
Arst4g01774 1116 Pfam ATPase family associated with various cellular activities (AAA) 569 714 IPR003959 GO:0005524|GO:0016887
Arst4g01774 1116 Gene3D - 84 164 - -
Arst4g01774 1116 SMART AAA_5 859 995 IPR003593 GO:0016887
Arst4g01774 1116 SMART AAA_5 565 717 IPR003593 GO:0016887
Arst4g01774 1116 MobiDBLite consensus disorder prediction 244 260 - -
Arst4g01774 1116 FunFam Peroxisome biogenesis protein 1 522 716 - -
Arst4g01774 1116 SUPERFAMILY ADC-like 10 80 IPR009010 -
Arst4g01774 1116 Gene3D - 824 1085 IPR027417 -
Arst4g01774 1116 FunFam PeRoXisome assembly factor 994 1071 - -
Arst4g01774 1116 SUPERFAMILY Cdc48 domain 2-like 86 163 IPR029067 -
Arst4g01774 1116 FunFam Nuclear valosin-containing protein-like 821 999 - -
Arst4g01774 1116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 825 1051 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01774 Arst-Chr4 31074276 31083640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01774 566 756 Calmodulin-binding Proteins AT3G56690 31.250 1.61e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01774 K13338 - gmx:100803882 1712.58