Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01749 ATGGAGAATATTGGTGATGAGTACCATCGTTATTGGGAGACCAGCATGTTCCTCCAAACCCAAGAACTCGACAACTGGGGTTTGGATGAGGCGTTGTCAGGCTACTACGATTCGAGCTCGCCGGACGGTGCGGCTTCGTCGGCGGCGTCGAAGAATATTGTGTCGGAGAGGAATAGAAGGAAGAAGCTCAATGAAAGGCTTTTTGCTCTTCGATCAGTGGTCCCCAACATCAGCAAGATGGATAAGGCTTCAATAATAAAGGATGCAATTGAGTACATACAAAAGTTGCAAGAACAAGAGAGGATAATTCAATCAGAGATAGTTGAGCTTGAGAGTGGTATGATGGTGGAGAAGAAGAACCCTAACAGCTATGAATTTGAGCATCAGGAGCTTCCAGTGTTGTTGAGGTCCAAGAAGAAGAGAACAGATGAGCTTTATGATTCTCTCAATTCTAGAAACTCCCCTATTCATATACTAGAGCTGAGAGTAACATACATGGGAGAGAAGACAATAGTGGTAAGCTTGACATGCAGTAAAAGGACAGATACAATGGTGAAACTGTGTGAAATTTTTGAGTCATTGAAACTGAAGATCATCACCGCCAATATCAGCAGATGAAGAAGAAAAAGATCTTTTGCAGATAAAGATCCAAACAGCAATTGCAGCTCTTAATGACCCTCTAAGTCCAATGAGCATTTGA 700 0.4257 MENIGDEYHRYWETSMFLQTQELDNWGLDEALSGYYDSSSPDGAASSAASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIEYIQKLQEQERIIQSEIVELESGMMVEKKNPNSYEFEHQELPVLLRSKKKRTDELYDSLNSRNSPIHILELRVTYMGEKTIVVSLTCSKRTDTMVKLCEIFESLKLKIITANITSLSSARLLKTVFIEADEEEKDLLQIKIQTAIAALNDPLSPMSI 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01749 247 Coils Coil 93 113 - -
Arst4g01749 247 Gene3D - 44 112 IPR036638 GO:0046983
Arst4g01749 247 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 43 114 - -
Arst4g01749 247 Pfam Helix-loop-helix DNA-binding domain 54 97 IPR011598 GO:0046983
Arst4g01749 247 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 46 232 - -
Arst4g01749 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 114 IPR036638 GO:0046983
Arst4g01749 247 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 47 96 IPR011598 GO:0046983
Arst4g01749 247 SMART finulus 53 102 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01749 Arst-Chr4 29873416 29883999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01749 1 218 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 60.090 8.74e-81 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst4g01749 HLH 4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01749 - - aip:107639158 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01749 4 29873416 29883999 Arst4g01749 4 29873416 29883999 ECH
Arst1g02788 1 89683987 89687543 Arst4g01749 4 29873416 29883999 PCT