Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01614 ATGGAGTGGGACAGCAATTCCGATCTCAGCACCGATGACGACGAACCCTTCCTCCGCGGCGGCTCCAACGACGACGAAGATTTCGGTGTCGGACCTATCCCTTTCCCGGTTCTCCAAACCGCGCCGTGCGGCTTCGTGGTTACTGACGCGCTCGAACCTGACCAACCTATCATATACGTCAACACCGTCTTCGAGATGATTACCGGCTACCGTGCTGAGGAAGTTCTCGGTCGCAACTGCCGCTTTTTGCAGTGTCGAGGCCCATTTGCTAAGCGAAGGCATCCACTGGTGGACTCAACAGTAGTAGCAGAAATTAGAAGATGCCTCGAAGAAGGGGTTGAATTTCAAGGTGAGTTGCTGAACTTTAGGAAAGATGGATCTCCACTTATGAACAGACTGCGGCTGACACCTATATATGGAGATGATGAGATAACTCATGTCATTGGAATCCAGTTCTTCACAGAGGCAAACATTGATCTTGGTCCTCTTCCAGCTTCAACTAAGGAGTCTACTAAATCAGATCGTTTTCGATCCGTGCTTTCCTCATTGCATCCTCGTGAGGTGGGGGACCGAAATGTGACTCGTGGCCTCTGTGGAATATTGCAATTGAGTGATGAAGTAATTTCTCTCAAGATACTTGCTCGCTTAACTCCAAGAGATATTGCATCAGTTGGTTCTGTTTGTAGGCGTTTGTATGAGCTGACAAGAAATGAAGATCTATGGAGAATGGTGTGCCAAAATGCATGGGGATGTGAGACTACACGTGTTTTAGAGACCGTGCCTGGTGCAAGGAGACTTGGATGGGGTCGGTTGGCAAGGGAGTTGACCACACTTGAAGCAGCAGCATGGAGGAAACTGACCGTTGGAGGTGCTGTTGAACCCTCACGCTGTAATTTCAGCGCATGTGCAGTTGGCAACAGGGTTGTCCTATTTGGTGGTGAAGGAGTTAACATGCAACCTATGAATGACACCTTTGTATTAGATCTTAATTCTAGTAATCCCGAGTGGCAACACGTCCAGGTGAGCTCTCCTCCTCCTGGTCGTTGGGGCCACACACTTTCTTGTGTTAATGGTTCCCGCTTGGTTGTATTTGGAGGGTGTGGAAGGCAGGGCTTACTTAATGATGTCTTTGTTCTTGACCTGGATGCAAAGCCTCCAACTTGGCGAGAAATTTCTGGATTGGCACCTCCACTTCCTAGATCATGGCACAGCTCTTGCACTCTTGATGGTACCAAGTTGATAGTTTCTGGAGGCTGTGCTGATTCTGGAGTCCTCTTGAGTGATACTTTCCTCCTTGATTTGTCAATGGAGAAACCTGTCTGGAGGGAGATACCAGTGACATGGACTCCACCTTCTCGTCTAGGCCACACCCTTTCTGTTTATGGTGGTAGGAAAATATTGATGTTTGGGGGTCTGGCCAAGAGTGGACCACTGCGTTTTCGCTCAAGTGATGTATTCACGATGGATTTAAGTGAGGATGAACCGTGCTGGAGGTGTGTAACAGGGAGTGGGATGCCTGGTGCTGGAAACCCTGGGGGAATAGCTCCTCCTCCTAGGCTTGATCATGTGGCTGTTAGTCTTCCTGGTGGGAGAATTCTGATATTTGGTGGGTCCGTTGCAGGACTTCATTCTGCCTCCCAACTTTACATCCTTGATCCAACGGATGAGAAGCCAACATGGAGAATCCTAAATGTACCAGGGCGGCCTCCTAGATTTGCATGGGGACATAGCACATGTGTTGTTGGAGGGACAAGAGCTATTGTGCTCGGTGGCCAAACGGGGGAGGAATGGATGCTAAGTGAGCTCCATGAACTTTCCCTGGCAAGTTCTGTAATCTAG 1839 0.4916 MEWDSNSDLSTDDDEPFLRGGSNDDEDFGVGPIPFPVLQTAPCGFVVTDALEPDQPIIYVNTVFEMITGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDSTVVAEIRRCLEEGVEFQGELLNFRKDGSPLMNRLRLTPIYGDDEITHVIGIQFFTEANIDLGPLPASTKESTKSDRFRSVLSSLHPREVGDRNVTRGLCGILQLSDEVISLKILARLTPRDIASVGSVCRRLYELTRNEDLWRMVCQNAWGCETTRVLETVPGARRLGWGRLARELTTLEAAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSSNPEWQHVQVSSPPPGRWGHTLSCVNGSRLVVFGGCGRQGLLNDVFVLDLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPVTWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEDEPCWRCVTGSGMPGAGNPGGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLASSVI 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01614 612 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 33 609 - -
Arst4g01614 612 FunFam Adagio protein 1 197 244 - -
Arst4g01614 612 Gene3D PAS domain 35 162 - -
Arst4g01614 612 Gene3D - 198 285 - -
Arst4g01614 612 FunFam Putative LOV domain-containing protein 478 611 - -
Arst4g01614 612 SUPERFAMILY Galactose oxidase, central domain 283 597 IPR011043 -
Arst4g01614 612 CDD PAS 41 143 IPR000014 -
Arst4g01614 612 Pfam Galactose oxidase, central domain 358 407 - -
Arst4g01614 612 Gene3D - 452 610 IPR015915 GO:0005515
Arst4g01614 612 Gene3D - 286 451 IPR015915 GO:0005515
Arst4g01614 612 SUPERFAMILY PYP-like sensor domain (PAS domain) 41 151 IPR035965 -
Arst4g01614 612 ProSiteProfiles PAS repeat profile. 37 112 IPR000014 -
Arst4g01614 612 Pfam PAS domain 42 151 IPR000014 -
Arst4g01614 612 FunFam Adagio protein 1 35 162 - -
Arst4g01614 612 Pfam Galactose oxidase, central domain 296 346 - -
Arst4g01614 612 Pfam F-box-like 208 246 IPR001810 GO:0005515
Arst4g01614 612 MobiDBLite consensus disorder prediction 1 23 - -
Arst4g01614 612 FunFam Putative LOV domain-containing protein 273 477 - -
Arst4g01614 612 CDD F-box_AtADO-like 199 245 - -
Arst4g01614 612 Pfam Kelch motif 520 567 IPR011498 GO:0005515
Arst4g01614 612 Pfam Kelch motif 453 504 IPR011498 GO:0005515
Arst4g01614 612 SUPERFAMILY F-box domain 191 261 IPR036047 GO:0005515
Arst4g01614 612 NCBIfam PAS domain S-box protein 54 150 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01614 Arst-Chr4 24904922 24910175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01614 37 152 AGC Kinase Gene Family AT5G58140 34.188 3.93e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01614 K12115 - gmx:100802828 1142.87