Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01613 ATGGATAAATTTCTGAATGACATTGAAAAGGACAAGCCATTTAGGTTCACTACTCAACAGTTAAAGATTGTAACTGATAACTTCTCTTATTTATTGGGATCGGGAGGTTTTGGTTCGGTATACAAAGGAGTTTTTAGTGACGATACCATTGTAGCTGTGAAGGTTCTGTTTAGAAGTTCTGACAAAGGAATCCAAGAACAGTTTATGGCTGAAATTGGAACTTTAGGTAAAGTTCATCATTTCAACTTAGTTAAACTATTCGGATTTTGTGTTGAAAAGAACTTGATTGCAATAGTTTATGAGTACATGGGAAATGGCTCTCTTGACAAGTATTTATTCAAACAAGTTAAGGCTTTGGAATTTGAAAAGCTTCATGAGATTGCGGTTGGAACAGCAAGAGGCATTGCTTATTTGCACGAAGAGTGTCAACAAAGAATAATTCACTATGATATTAAGCCGGCGAATATTCTCTTGGACATGAATTTCAATCCTAAGGTTGCGGATTTCGGATTGGCCAAGCTCTGCAACAGGGATAATACTCATATATCCATGACTGGAGGCAGGGGAACCCCCGGCTATGCTGCGCCGGAGCTTTGGATGCCTTTCCCTGTGACTCACAAATGTGATGTTTATAGCTTTGGGATGTTGTTGTTTGAAATCATTGGTGGGAGAAGAAATGTTGATACTAATGTTCCGGAAAGCCAAGAGTGGTTTCCAATGTGGGTTTGGAAAAAAATTGATGCTGGAGAGTTACAGAATTCAACATTAGTGTCTGAATTATTGTTGGAGAAACATAAGGAGATGGTAGAAAGAATGGTTAAGGTAGCTTTGTGGTGTGTTCAGTATAGGCCAGAATCAAGGCCTATGATGAGTGCTGTTGTGAAAATGTTGGAAGGCTCAGTAGAGATTTCTCAACCTTTGAATCCATTTCAATACTTGATGGACAATGGTTTTGCTACTCTTCCACAGCAATATTCATCAAATAATTGCAATGGTACAACTGCAACTACAAGTAGTTATTGTGACTCTTCTGTGATTGATGTGGACTCCAATATTGTAACTGCTGATCCAATTTAG 1077 0.3835 MDKFLNDIEKDKPFRFTTQQLKIVTDNFSYLLGSGGFGSVYKGVFSDDTIVAVKVLFRSSDKGIQEQFMAEIGTLGKVHHFNLVKLFGFCVEKNLIAIVYEYMGNGSLDKYLFKQVKALEFEKLHEIAVGTARGIAYLHEECQQRIIHYDIKPANILLDMNFNPKVADFGLAKLCNRDNTHISMTGGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGGRRNVDTNVPESQEWFPMWVWKKIDAGELQNSTLVSELLLEKHKEMVERMVKVALWCVQYRPESRPMMSAVVKMLEGSVEISQPLNPFQYLMDNGFATLPQQYSSNNCNGTTATTSSYCDSSVIDVDSNIVTADPI 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01613 358 Gene3D Transferase(Phosphotransferase) domain 1 103 308 - -
Arst4g01613 358 CDD STKc_IRAK 32 299 - -
Arst4g01613 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Arst4g01613 358 Pfam Protein tyrosine and serine/threonine kinase 31 297 IPR001245 GO:0004672|GO:0006468
Arst4g01613 358 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 10 307 - -
Arst4g01613 358 Gene3D Phosphorylase Kinase; domain 1 3 102 - -
Arst4g01613 358 SUPERFAMILY Protein kinase-like (PK-like) 11 298 IPR011009 -
Arst4g01613 358 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 103 307 - -
Arst4g01613 358 ProSiteProfiles Protein kinase domain profile. 26 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g01613 358 ProSitePatterns Protein kinases ATP-binding region signature. 32 54 IPR017441 GO:0005524
Arst4g01613 358 SMART serkin_6 26 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01613 Arst-Chr4 24893998 24895074 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01613 15 312 Receptor kinase-like Gene Family AT5G38280 43.464 1.91e-82 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Arst4g01613 PK_Tyr_Ser-Thr 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01613 - - gmx:100816921 518.85