Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01612 ATGGTGGCTGTGAAGGTTCTGCATGGAACTTCTGACAAGATCATTCAAGCACAGTTTATGACTGAAATGGGAACGCTTGGTAAACTCCACCATTTCAATCTTGTTCGCTTATATGGATTTTGTTTTGGAAAAGACTTGACAGCGTTGGTTTATGAGTACATGGCAAATGGTTCTCTTGACAAGTATTTGTTAAAAGAAAACAATACATTAGGGTTTGAAAAGCTTCTTGAGATAGCGGTTGGAACTGCAAGAGGCATTGCTTATTTGCATGAAGACTGCCAACAAAGAATTATTCACTATGACGTTAAACCGGCCAATATTTTGTTAGACCGGAATTTCAATCCTAAGGTTTCCGATTTTGGTTTGGCAAAGCTTCATAACAGGGATAACACTCATATATCTATGACCGGTGGAGGAGGAGGCAGGAGAACCCCCGGTTACGCTGCGCCGGAGCTATGGATGCCGTTCCCGGTGACTCACAAGTGCGATGTCTATAGCTTTGGAATGTTGTTGTTTGAGATCATAGGTCGGAGAAGAAATGTTGATAATAATGTTCCAGAAAGCCAAGAGTGGTTTCCAATGTGGGTTTGGAAAAAAATTGATGTTGGAGAATTACAGGATTCAACATTAGTGTCTGAATTATTGTTGGAGAAACATAAGGAGATGGTAGAAAGAATGGTTAAGGTAGCTTTGTGGTGTGTTCAGTATAAGCCAGGATTAAGGCCTATGATGAGTGCTGTCGTGAAAATGTTGGAAGGCTCTGAAGAAATTCCACAACCTTCGAATCCATTTCAATACTTGATGGACAATGGTTTCACTGCTGCTCTTCCACACCGATACTCATCGTATAATTGCAATAGTACGACAACTGTAACTACAAGTAGTTATTGTGACTCTTCTGTGATTGCTGTGGACTCCAATATTGTAATTGCTGATCCAATTTAG 945 0.4042 MVAVKVLHGTSDKIIQAQFMTEMGTLGKLHHFNLVRLYGFCFGKDLTALVYEYMANGSLDKYLLKENNTLGFEKLLEIAVGTARGIAYLHEDCQQRIIHYDVKPANILLDRNFNPKVSDFGLAKLHNRDNTHISMTGGGGGRRTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRRNVDNNVPESQEWFPMWVWKKIDVGELQDSTLVSELLLEKHKEMVERMVKVALWCVQYKPGLRPMMSAVVKMLEGSEEIPQPSNPFQYLMDNGFTAALPHRYSSYNCNSTTTVTTSSYCDSSVIAVDSNIVIADPI 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01612 314 SUPERFAMILY Protein kinase-like (PK-like) 2 293 IPR011009 -
Arst4g01612 314 Gene3D Phosphorylase Kinase; domain 1 1 54 - -
Arst4g01612 314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 97 109 IPR008271 GO:0004672|GO:0006468
Arst4g01612 314 SMART serkin_6 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g01612 314 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 263 IPR045874 GO:0004672
Arst4g01612 314 ProSiteProfiles Protein kinase domain profile. 1 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g01612 314 Pfam Protein tyrosine and serine/threonine kinase 2 251 IPR001245 GO:0004672|GO:0006468
Arst4g01612 314 FunFam Putative receptor-like protein kinase 54 259 - -
Arst4g01612 314 Gene3D Transferase(Phosphotransferase) domain 1 55 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01612 Arst-Chr4 24856381 24857325 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01612 2 293 Receptor kinase-like Gene Family AT1G56120 40.956 2.16e-61 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Arst4g01612 PK_Tyr_Ser-Thr 1.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01612 - - gmx:100816921 432.95