Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01503 ATGGCTTCTCCCCTTCTTCACCAGCCAACGCAGTTCTTTTTCTCCAACACCCAGTTAAAAGGACCTAGCCATGGATTCTTGTGGCGACCCCCTTGTTCTTCATTTGGCGCCTCTCATTCTGAAAACAAAGCTCGGCCCATTAGAGCTTCGGTTGATGCACCCACATTTCCATTGTTTCAGACTCCAAAACAGCATGACTCAGCCTCTGAGTTGGAGCCTGCAGATCCTGATTTCTACAAGATCGGTTATGTCCGAAGCATGAGAGCTTACGGAGTTGAGTTTAAGGAAGGGCCGGATGGATTTGGTGTGTATGCTTCCAAAGATGTGGAACCTCTCCGGCGAGCAAGGGTTATAATGGAAATTCCTCTTGAATTGATGTTAACCATAAGCAAGAAACTCCCATGGATGTTTTTCCCAGATATAATTCCTATAGGTCATCCAATATTTGATATTATCAACTCTACAGATCCAGAGACAGATTGGGACTTAAGGTTAGCTTGCCTCCTCCTATATGCATTTGATTGCGAAGACAACTTTTGGCAGTTGTATGGTGACTTCTTACCAAGTGCAGATGAGTGTACCAGCTTACTTCTAGCTTCAGAGGATGAACTTTCAGAGCTTCAAGATCCCGATCTTGCTTCTACTATGAGAAACCAGCAATATCGAGCCCAAGAATTCTGGGAAATGAACTGGCACAATTCTGCACCCCTTAAAATAAAGCGTCTTGCTCGTGATCCTCGAAGGTTCTTGTGGGCAGTGGGTATTGCACAGTCACGATGTATTAACATGCAGACGAGAATTGGTGCATTAACTCAAGATGCAAATATGCTTATTCCTTATGCTGATATGCTGAACCATTCCTTTGAGCCGAATTGCTTTCTGCATTGGCGTTTTAAGGACAGGATGCTTGAAGTTCTTATAAATGCTGGCGAGCAAATTAAAAGGGGAGATGAGATGACAATTAATTACATGAGCGGACAGAAGAATGAGATCCTAATGCAAAGATATGGATTTTCATCACCCGTGAATCCTTGGGATGTGATCAAATTCTCAGGCAATGCAAAGATTCATCTGGATTCCTTTTTGTCCGTCTTCAATATATCTGGCCTTCCCGAAGAATATTACCATAACACAGAATGTCTAGCAATCGATGGCGATACTTTTGTTGATGGAGCTGTTGTAGCTGCAGCACGAACATTGCCAACTTGGTCGGACAAGGATGTGCCTCCAATCCCTAGTGCAGAAAGAATGGCAGTAAAGGAGTTGCAACAAGAATGTCGACAGATGCTTGCTCAATACGCTACAACCTCTAAGCAAGACGAGAAATTGCTTGATTCCTTGCCGAACGCTCCGAGGACGCTCGAAGCTGCAATTAAGTATAGATTGCACCGGAAATTGTTCATTGAGAAGGTTATCCAAGCATTGGAGATCTATCAAGATAAGATACTTTTCTGA 1455 0.4344 MASPLLHQPTQFFFSNTQLKGPSHGFLWRPPCSSFGASHSENKARPIRASVDAPTFPLFQTPKQHDSASELEPADPDFYKIGYVRSMRAYGVEFKEGPDGFGVYASKDVEPLRRARVIMEIPLELMLTISKKLPWMFFPDIIPIGHPIFDIINSTDPETDWDLRLACLLLYAFDCEDNFWQLYGDFLPSADECTSLLLASEDELSELQDPDLASTMRNQQYRAQEFWEMNWHNSAPLKIKRLARDPRRFLWAVGIAQSRCINMQTRIGALTQDANMLIPYADMLNHSFEPNCFLHWRFKDRMLEVLINAGEQIKRGDEMTINYMSGQKNEILMQRYGFSSPVNPWDVIKFSGNAKIHLDSFLSVFNISGLPEEYYHNTECLAIDGDTFVDGAVVAAARTLPTWSDKDVPPIPSAERMAVKELQQECRQMLAQYATTSKQDEKLLDSLPNAPRTLEAAIKYRLHRKLFIEKVIQALEIYQDKILF 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01503 484 Gene3D set domain protein methyltransferase, domain 1 84 338 - -
Arst4g01503 484 Pfam Rubisco LSMT substrate-binding 414 465 IPR015353 -
Arst4g01503 484 Pfam SET domain 100 323 IPR001214 GO:0005515
Arst4g01503 484 FunFam Plastid transcriptionally active 14 360 481 - -
Arst4g01503 484 Coils Coil 419 439 - -
Arst4g01503 484 CDD SET_LSMT 91 338 - -
Arst4g01503 484 SUPERFAMILY SET domain 99 339 IPR046341 -
Arst4g01503 484 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 335 476 IPR036464 -
Arst4g01503 484 FunFam Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 84 338 - -
Arst4g01503 484 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 50 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01503 Arst-Chr4 20254090 20259673 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst4g01503 SET 7.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01503 - - gmx:100790985 798.505