Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01487 ATGGCATCATCACAAGTTGAAATTGCTTCGTCTTCGCCCTTTGGTTTGGTTCTGAGGGACCGTAACCACCGTGGCGATGGATGCAGAGAAAGCAATGTTGTTAATAAGGCCACACATGCTGCTCTTCAAAGGAACATCAAGAACTTCGTCATGGACCACCTTAACATGTCCATGTCCATGTCCAACTCTGATTCAACAAGAAATCTCAACGAGAACAATTCCGCCCATTGGAACGAAATTCATCATAATCAAGATCATGACCATGACAACCAACATCGCCGCCACCACCGGCGCCACCGCAACGTGTCGAATCTTCATGTCTCAAGTGCCATGGAGTTCAAGGATGGATCCTCATTGAACTCTTTGATTAGCCCGAGACAAACCCGGCTTCTTGATCGCTGGGCCGCGAAACAAGCCCGGGAGATTGTTTCAAATTTAGAGAGTGAGGCTGGGTTGTTGTCAATCGATAATAACAAGAAAGAACTTGGAAGCACAGGTAGTTGCAACTCTGATGGTGATGATAACAAGTGTGTAGATATCTCGAACCTTGCTGCTTCTTCACTTGTTCAGATATGGGAGAAGAGGCTCAGTGGATCCAAGCCTGAAACGACGGCGTCTAATGGCGCCAAAACTAGTCCCACTGCTGTTACTTCCACCAATAATTGTGATTCCGAGGCAGGGGAATCTTCTTCCTGCGCCGTGGCGAACGAGGACTGGGAAACACACAGTGATCAGTCCTTTTCGCCACAGTCGCGGTGGTCGTCTTGCGAGACTGCAACAACAGAGGCAGAAAGGCCGGTTTCTGTTGCAGACATAATCAAGAGGCTAACTACACCAAGTGTCCATGGCGATGACAATGAATCTGAGGGGTTTATTAGCAGCGTGGCAAGCTCTCCTTGCAGAGATTTGGCACCGGAGAATTCTGAGAGGAGGGCTTTTCCCCTCATGATTGGTGCCCCGGGAAGGATTCGAGGCCGCCGGATTTTCACCGATATGCTTATGCAGCTGGAGAGGGACCGCCGAGGGGAGCTTAACCACCTGGCAGAACGCCGAGCCGTGTCGAGGTTCCCTCAAAAAGGACGAATTCAGTCATTGCTTCGATTAAGATTGTTGCAGCGGAATGCAGCGGCTGAGAATGATAAATCTCAACAGAAATCAACATTATCTAGACAGAATAAACAGACACAAGAATCTGCTGTTGTTATGGAACGAAGGGGGAAATTTAGCACCGCAGTTGAACACAGAAATGCGGAACAGGCAGAAGTAGCTCATCCAACAACGTCACTGGTACAGACAGTTACAAATCCTGTAGCGTCGGATAAGTCTGCTGGCAAAGACACTTGCAACCAGACTGTTGTTCATGAGACTGCTAATAGCTCTGGAGAATCCACGCGAGTATCAATCCCTGAGACTAATGCAGACCACAATAAAGAGAAAGCACATGCAAGTTCACATGTGACACTGCAAGAAACATGTGCAGAGGTTCAAAATAATGATTCGCTTGATACTGCCAAGGCACCAGCATCGATGGCTGATGATTCGGGCCATAATGAGATTGCAAACGGGGCTGAGTCAAGCGAACAACAGCATGCTGTAGAAGGGAGAGATGCAACAGATCAACACATTGATGAATACAAAGAGATGCTTGCCACTTCTCAAAATGAGGATATACGTATTCTCCTTGAAAGAAAAACAGTCTCGACTTTCCTTTCCAGCAGCTTCCGGGCAGTGATAGATAGATTGATGAACTCCCATAAGGGAACACAGACGCAACTAGTCAATTGCCAAGATGATGAGGACGAAAACCAAATTCTGATGGCGTATCTACAAGAACGCATGCGTTCTGCAAAATCTCCTCAAGAAGACAAACAAGAGGGAGGAGGGGAGGAGGAAAAGCGAGACGAGATGCAAAATGCTGGACAAGAAGAGGAGCAGAGGCAGGAGCAGGAGCGGTGTCATGAAGATGTTGAGTATTTTCAACAATCCTCATCACCATGCCCTTCAAGAACATGGAATTATAAAGACAATGAAACCTGTGATGATTCTGATGGAGTAGTATTTGCATGTGCATCTGCATCTACATATTCTCCTTCACATTCACAACCCTCTCAGTTTCAATCTGCCTATCATGATAATAGGCGAAGTTCTTCACCGCCTAATCATCATTCAATGGAAATGGAACTCATCTATGATTTGAGAAGACAAATGGAGCAACTTCATCATGAGATGTCTGAGCTAAGGAAATCGATTAAGAGCTGCGTGGATATGCAGATTCAGATGCAATTACAACAGCAATCCATGGTTCAAACAGTTAACAAAGAAGAAAACATGACGCAGAAGAAGGTACCAAAAAAAGGCAATTGCTGTATATGCCATGATAATAAAGCTGACTCAATTTTATACAGGTGTGGGCACATGTGTGCGTGTCTAAAGTGTGCCAATGAGCTGCAATGGAATGGTGGAAAGTGTCCAATTTGTCGAGCCAAAATATTAGATGTTGTTCGAGTATACATTGATGCTTAG 2523 0.4578 MASSQVEIASSSPFGLVLRDRNHRGDGCRESNVVNKATHAALQRNIKNFVMDHLNMSMSMSNSDSTRNLNENNSAHWNEIHHNQDHDHDNQHRRHHRRHRNVSNLHVSSAMEFKDGSSLNSLISPRQTRLLDRWAAKQAREIVSNLESEAGLLSIDNNKKELGSTGSCNSDGDDNKCVDISNLAASSLVQIWEKRLSGSKPETTASNGAKTSPTAVTSTNNCDSEAGESSSCAVANEDWETHSDQSFSPQSRWSSCETATTEAERPVSVADIIKRLTTPSVHGDDNESEGFISSVASSPCRDLAPENSERRAFPLMIGAPGRIRGRRIFTDMLMQLERDRRGELNHLAERRAVSRFPQKGRIQSLLRLRLLQRNAAAENDKSQQKSTLSRQNKQTQESAVVMERRGKFSTAVEHRNAEQAEVAHPTTSLVQTVTNPVASDKSAGKDTCNQTVVHETANSSGESTRVSIPETNADHNKEKAHASSHVTLQETCAEVQNNDSLDTAKAPASMADDSGHNEIANGAESSEQQHAVEGRDATDQHIDEYKEMLATSQNEDIRILLERKTVSTFLSSSFRAVIDRLMNSHKGTQTQLVNCQDDEDENQILMAYLQERMRSAKSPQEDKQEGGGEEEKRDEMQNAGQEEEQRQEQERCHEDVEYFQQSSSPCPSRTWNYKDNETCDDSDGVVFACASASTYSPSHSQPSQFQSAYHDNRRSSSPPNHHSMEMELIYDLRRQMEQLHHEMSELRKSIKSCVDMQIQMQLQQQSMVQTVNKEENMTQKKVPKKGNCCICHDNKADSILYRCGHMCACLKCANELQWNGGKCPICRAKILDVVRVYIDA 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01487 840 SUPERFAMILY RING/U-box 787 832 - -
Arst4g01487 840 Coils Coil 729 749 - -
Arst4g01487 840 MobiDBLite consensus disorder prediction 693 714 - -
Arst4g01487 840 MobiDBLite consensus disorder prediction 198 261 - -
Arst4g01487 840 Coils Coil 374 394 - -
Arst4g01487 840 MobiDBLite consensus disorder prediction 376 402 - -
Arst4g01487 840 Pfam Zinc finger, C3HC4 type (RING finger) 785 832 - -
Arst4g01487 840 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 770 839 IPR013083 -
Arst4g01487 840 CDD mRING-HC-C3HC5_NEU1 785 837 - -
Arst4g01487 840 MobiDBLite consensus disorder prediction 612 669 - -
Arst4g01487 840 MobiDBLite consensus disorder prediction 376 399 - -
Arst4g01487 840 PANTHER BNAC05G24000D PROTEIN 543 839 - -
Arst4g01487 840 MobiDBLite consensus disorder prediction 615 657 - -
Arst4g01487 840 ProSiteProfiles Zinc finger RING-type profile. 788 827 IPR001841 -
Arst4g01487 840 MobiDBLite consensus disorder prediction 504 537 - -
Arst4g01487 840 MobiDBLite consensus disorder prediction 82 102 - -
Arst4g01487 840 MobiDBLite consensus disorder prediction 693 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01487 Arst-Chr4 19728758 19733245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01487 788 836 C3H Transcription Factor Family AT3G06140 38.776 2.27e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01487 - - ahf:112741787 1498.41