Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01465 ATGTCTCGATTTCTCATTCTACCCAAACACTTTGCTTCCATCAATCCATGGCCATGGCTTTCTTTGAGTCTCTTCTCAACTCGTTCTTCTTCTTCAAGATCCAAAGGCAAGTCTTTCACTGTCTCATACCTCGTTGGAACTTGCGGGTTCTCACCAGAACGTGCAGTTTCCGTTTCCAAACGCTTTAGCTTCAAAACAAGCGAAAGACCAGACACAGTGATTGCGTTCTTCAGGAACATTGGGTTATCCCAAACGTCACTGTTCAGAGTCCTCCAATCCATGCCACAGTTACTCGTAGCCAGTCCCGAGAGATCTTTGCAGCCAAAAATCGATTTTTTTAAGTCCAAAGGGTTTTCTACCTCTGATATATGCAAGACCATTGTTAATAACCCTTTGATCCTCATCCGAAGCGTGCAGGTTCAGATAGCTCCCGCGTTTGATTTCTTCGATGACATGTTTCCCTCTAGGGATAAGCTCATCAAAGCTATTATCCGTAATTCGAGTATTCTCTATGACTTTAAAATATATGTAGAACCTAATATAAAGCTGCTTAGAGAAGCAGGAGTTCCTATTTCACATGTTATTAGGTTAATAGAATACTGCCCTCGCCAATTGAAGGCAAACCCTAAGAGGTTTAAGGAGGTATTGCAGGAAATTAAGGAGATGAAGTTTGATCCCTTCAAGTTTCAATTTGTTGTGGCTATTTATGTGAATGTAACCGTAGGAAAATCCTCATTGGCAAGAAGGAAAGGTATTTATAGAAAGTGGGGTTGGACCGATGGCAATATTTTTGCAGCATTTAGAAACCATCCGTGGTGTCTTGTCATCTCGGATGACAAGATTGAAGCAATCATGGATTATCTGGTGAATGAATTGGGTTATTCCGCTTCTTCTATATCTAGTAATCCCTGGGTGTTGTCCATGAGTTTGAAAAGGCGGATTATTCCCAGGGGTTCTGTTATTCTAGTTTTGCAGTCTAAGGGTCTGGGGAGGAAGCTGGGCTTGGGTACAATATTTAGGTGCAATGAAGAGATCTTCTTGAATAAGTTTATCTTCCGCCATGAGAAAGAAGCTGACGATCTATTGAAGTTGTATCAAGCTAATTTAGGAAAAGAGCAAGTCCATAAGAGAAAAGAATGTAATGATTAA 1149 0.4082 MSRFLILPKHFASINPWPWLSLSLFSTRSSSSRSKGKSFTVSYLVGTCGFSPERAVSVSKRFSFKTSERPDTVIAFFRNIGLSQTSLFRVLQSMPQLLVASPERSLQPKIDFFKSKGFSTSDICKTIVNNPLILIRSVQVQIAPAFDFFDDMFPSRDKLIKAIIRNSSILYDFKIYVEPNIKLLREAGVPISHVIRLIEYCPRQLKANPKRFKEVLQEIKEMKFDPFKFQFVVAIYVNVTVGKSSLARRKGIYRKWGWTDGNIFAAFRNHPWCLVISDDKIEAIMDYLVNELGYSASSISSNPWVLSMSLKRRIIPRGSVILVLQSKGLGRKLGLGTIFRCNEEIFLNKFIFRHEKEADDLLKLYQANLGKEQVHKRKECND 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01465 382 FunFam Mitochondrial transcription termination factor-like 138 358 - -
Arst4g01465 382 Pfam mTERF 141 346 IPR003690 GO:0003690|GO:0006355
Arst4g01465 382 Pfam mTERF 75 225 IPR003690 GO:0003690|GO:0006355
Arst4g01465 382 SMART mt_12 160 190 IPR003690 GO:0003690|GO:0006355
Arst4g01465 382 SMART mt_12 296 330 IPR003690 GO:0003690|GO:0006355
Arst4g01465 382 SMART mt_12 264 295 IPR003690 GO:0003690|GO:0006355
Arst4g01465 382 SMART mt_12 88 119 IPR003690 GO:0003690|GO:0006355
Arst4g01465 382 SMART mt_12 195 225 IPR003690 GO:0003690|GO:0006355
Arst4g01465 382 SMART mt_12 124 154 IPR003690 GO:0003690|GO:0006355
Arst4g01465 382 Gene3D Transcription termination factor 3, mitochondrial 172 364 IPR038538 -
Arst4g01465 382 Gene3D Transcription termination factor 3, mitochondrial 52 171 IPR038538 -
Arst4g01465 382 PANTHER CGI-12 PROTEIN-RELATED 35 355 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01465 Arst-Chr4 19329195 19332188 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Arst4g01465 mTERF 1.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01465 K15031 - qsa:O6P43_003531 319.701