Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01452 ATGTTTAACTCCCACCGTTACAAACCCCTTATCTATCTAAACCTAAAAGTTCTATTCCGAAGAACACAACCACACATGTTCTGCACTTCACAATCACACTCTTTGACGGTTTCATACCTCATCAATAACCTTGGCTTCACCCCACAATCTGCTCTAAACGCATCAAAACGGCATCGTTTCAAGACCCCACACAAGGCAGACTTAATAATCGCATTCTTCAAGACCCATGGATTCTCCCATTCCCAAATCGCTGCCATTGTTGCCAAGCTACCTAAGATACTTTCAGCCAATCCGGAAAGAATCCTGCCAAAGTTTCAATTTCTGGCCTCCAAAGGTGCTTCCACCGATGACATTGTTCTGCTAGCCACTAGGAACCCTAGATTCTTGCATTCGAGCCTCAAGAACAACATAATCCCTACTTATGGAATGATGAAAACCTTCTTTGAATCCGATCAGAAAACGCTCCGTTGCATTGCTTCTTTCCCTGCTTTGTTCATGGAGCATCGCTTGGTGAAAAATGTCAAGTTGTTGGCTGATGCAGGAGTCTCTAACTCCGCAATCCACCATTTGTGTCGTACCAGGGTGTCCGTGCTCTATTCTTCTGATTTGAGGAAGCTTGTGGATGAAGTAAAGGAATTAGGGTTTGATCCGTCATCGGTTAAATTCGCCATAGCTTTGCTAGCCAAGAAGACTATACGGAAATCACTGTGGGATGCGAAAGTCGATATCTTGAAGAGCTGGGGTTGGTCTAAAGAAACAACGTCCCAAGCATTCTGGAGGAACCCTTTATGTATGCTATCATCTAAGGATAAGATTAATGAGGTGATGAAACTTTGGGTCAATCAATTAGGTTGGGACCCTTTGGCTCTTGCCAAGATTCCATGGCTTTTTGGATATAATTTGGAGAGAAGGATTATTCCGAGGGCTTTTGTTCTTCAGTATTTACTTTCAAGAGGTCTGAGAAACAAGAATGATGAATTAAGTAACCCATTTTTTATTTCTGAAGAGTTGTTCGTTAAAAGGTTTGTGGAATGTTTTCCCGAGGAAAGGTCTCAACTACTTAAGATATACCATGAGAAAAAAGGATGTTCATGA 1095 0.4201 MFNSHRYKPLIYLNLKVLFRRTQPHMFCTSQSHSLTVSYLINNLGFTPQSALNASKRHRFKTPHKADLIIAFFKTHGFSHSQIAAIVAKLPKILSANPERILPKFQFLASKGASTDDIVLLATRNPRFLHSSLKNNIIPTYGMMKTFFESDQKTLRCIASFPALFMEHRLVKNVKLLADAGVSNSAIHHLCRTRVSVLYSSDLRKLVDEVKELGFDPSSVKFAIALLAKKTIRKSLWDAKVDILKSWGWSKETTSQAFWRNPLCMLSSKDKINEVMKLWVNQLGWDPLALAKIPWLFGYNLERRIIPRAFVLQYLLSRGLRNKNDELSNPFFISEELFVKRFVECFPEERSQLLKIYHEKKGCS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01452 364 Gene3D Transcription termination factor 3, mitochondrial 158 356 IPR038538 -
Arst4g01452 364 SMART mt_12 188 216 IPR003690 GO:0003690|GO:0006355
Arst4g01452 364 SMART mt_12 84 114 IPR003690 GO:0003690|GO:0006355
Arst4g01452 364 SMART mt_12 255 286 IPR003690 GO:0003690|GO:0006355
Arst4g01452 364 SMART mt_12 287 321 IPR003690 GO:0003690|GO:0006355
Arst4g01452 364 SMART mt_12 155 183 IPR003690 GO:0003690|GO:0006355
Arst4g01452 364 SMART mt_12 119 151 IPR003690 GO:0003690|GO:0006355
Arst4g01452 364 FunFam Mitochondrial transcription termination factor-like 133 350 - -
Arst4g01452 364 PANTHER CGI-12 PROTEIN-RELATED 32 345 IPR003690 GO:0003690|GO:0006355
Arst4g01452 364 Pfam mTERF 239 329 IPR003690 GO:0003690|GO:0006355
Arst4g01452 364 Pfam mTERF 71 220 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01452 Arst-Chr4 18446548 18471163 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Arst4g01452 mTERF 4.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01452 K15031 - gmx:102666739 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03443 1 95463772 95472680 Arst4g01452 4 18446548 18471163 PCT