Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01417 ATGTCTTCTAGTTCTTCTTCTTGGCTTACTTCACCTTCTTGTTCACCTCTATCAGTGGATTCATCTTCTCCTACTTCACAACTTGTAGCTCAATGGTTGAGGTTCATATTCCTATCACCATGTCCTCAGAGACTTCTTCTTTCTGCCATTGATCTCATCTTCTTGATCACCCTCTTAGCCTTTGCAGCTCAAAAGATCTATTCTAGATTCATTTCTAATGCCAACTCTGGCTCCACAATCACCAAGCCTCTTTTGCAGGACAAAGATTCAGATTACAAGGTTACCTTGTGGTTCAAACTACCCCTTTTGGTGACATCACTCTTGGCTCTGACTTACACTGTTCTAAGCATCTTGGCCTTCACTCAAAGCAATCTTGCCTCATGGAGACAGATAGAGGCCCTCTTTCGCCTCGCGCAAGCAATAACCAACATAGTGATAGTGATTCTGATGGTACATGAGAAGAAGTTCAAAGCTCGAAAGCACCCTTTGTCACTAAGATTCTATTGGATTGCAAACTTTGTTGCTGCTTTCCTTTTTGCCACTTCGGCCATTATTCGATTAGTAAGTGTTGAGGAATCGAGTTTGGAGGCTAATTTGAGAGTGGATGATGTGTTTTCTTTCATCAATCTTGCAGTTTCTTTGTTCCTTTTCGTAATAGCAATCAAAGGGTCATCAGGGATTGATGCTATAAGAATTTCTGATGTGATTGAAAGTTCAAGAACATGGCTTTCCAATGACAGGACTACGAGTCTTTATGGCAATGCTTCTTTGTTCTCCAAAACAGTGTGGCTTTGGATGAATCCTTTGCTCAACAAAGGGTACACAACACCACTCAAACTCCAAGATGTTCCAACGCTTCCTCTCGAGTTTCGGGCCGAAAGGATGTCAGAGCTTTTCCAAGAATATTGGCCAAAGCCAGAGGAAAACTCCAAGCACCCTGTTGGATTCACCCTGCTAAGATGCTTCTGGAAACACATAGCATTCACCGGCTTCCTCGCAGTTGTTCGGCTCGCGGTTATGTACATCGGTCCAGTGCTTATTCAGAGCTTTGTAGATTTCACATCAAAGGCTAATCCTTCTCCCTATGAAGGACTTGTCCTGATTTCAATCCTGCTTGTGGCAAAATCAATTGAAGTCCTCAGTGTTCATCAATTCAACTTCCACTCTCAGAAACTCGGCATGCTTATTCGTTCCAGCATCATTACTTCAGTTTACAAGAAGGGTCTAAGATTATCTAGCACTGCAAGGCAGGCTCACGGAACTGGCCAGATTGTGAATCATATGGCTGTTGATGCTCAACAGCTATCTGATTTGATGCTTCAGCTTCATCCTATTTGGTTAATGCCATTGCAAGTTGCAGCGGCGTTGGCCTTAATTTATACCTATGTTGGCTTGTCTGCAGTTGCAGCCCTGCTTGGAACTGCTGTGGTGTTTGTTTTCACTCTGATTCGGACGAAGAAAAGCAACAGTTTCCAGTTCAGGATCATGATGAGCCGTGACTTGAGGATGAAGGCAATTAATGAGCTTCTCAACAACATGCGTGTCATCAAGTTTCAAGCATGGGAGGATTACTTCGGCAACAAGATTCGCCAATTTCGCCAAGCTGAGCACGGTTGGATTGGCAAGTTCTTGTATTATTTTGCTGTCAACATGGCAATTCTCTCCAGTGCTCCTCTCTTGGTCACGGTTCTTACCTTTGGAACCGCCACGTTTCTTGGGATTCCTCTTAATGCTGGAACTGTTTTCAGCATAACTTCAGTGATCAAGATTCTGCAGGAGCCGGTTAGGACTTTCCCTCAGGCTCTTATGTTGATTTCTCAGGCTATGGTTTCTCTAGGGAGGTTGGATGAGTTCATGATGAGTAAGGAAAGGGATGAGAATGCAGTACAAAGAGATGATACATGCGAAAGCGACATAGCCGTGGAGATGAAAGATGCGAAATTCTCTTGGGATGATGAGGAAGGGAATGAGGCTCTGAAGGTTGAAGAGCTGGAGATTAGGAGAGGGGACCATGCTGCAGTTGTTGGAACTGTTGGCTCAGGAAAATCTTCATTGTTGGCTTCTGTGTTGGGGGAAATGTACAAAATTTCAGGAAAGGTCAGAGTTTGTGGGACAGTTGCATATGTAGCACAAACATCATGGATTCAGAATGCAACCATCCAGGAAAACATATTGTTTGGACTACCAATGAACCAGAAGAAATACAAAGAAGCCATAAGAGTGTGCTGCCTGGACAAGGATCTAGAAATGATGGAGCATGGAGACCAGACTGAGATAGGAGAAAGGGGTATTAACCTCAGCGGCGGCCAGAAGCAACGAGTGCAACTGGCCAGAGCTGTGTACCAAGATTGTGACATCTATCTCCTTGATGATATATTCAGTGCTGTTGATGCCCAAACAGGATCATTCATTTTCAAGGAATGTGTTATGGGAGCTCTTAGACATAAGACCATTTTACTAGTAACTCACCAAGTTGATTTCCTGCATAATGTTGACTCTATAATGGTGATGCGAGACGGGAGAATTGTGCAAAGTGGAAAGTATGATGAACTTCTCAAAGCTGGCCTGGATTTTGGTGCACTTGTGGCTGCTCATGAAAGTGCTATGGAGATTACAGAAACTGGTGATGGGTCTAGCCAGTCTCCAAAGTTGGCTCGCATTCCTTCGAAGGAAAAGGAAAGCGCAGGCGAAAAGCAATCTCAAGAGCAATCTAAGTCTGATAAGGGTTCATCAAAGCTCATTGAAGAGGAGGAGAGGGAAACTGGCCAAGTCAATCTCCGAGTATACAAACATTATTTCACTGAAGCATTTGGATGGTGGGGAGTAGCACTCATGCTGGCAATGTCTTTAGCATGGATCATAGCCTTCTTGGCTGGTGACTACTGGCTAGCATTTGCAACTTCAGAAGCTTATACTGTTCCTTCTTTCATTTTCATTATTGTGTATGCTGCCATAGCAGCAGTTTCATGCATAGTAGTGATGATCAGGTCATTCTTATTTACATATTGGGGTCTAAAGACATCTCAAAGCTTCTTCATTGGTATGCTTGATAGCATTCTGCATGCACCAATGTCATTCTTTGACACCACTCCTTCTGGCAGAATCTTAAGTCGTGTATCTACTGATCTACTTTGGGTTGATATATCAATTCCATTGTTAGTAAGCTTTGTGATGGTGTCATACTTCTCATTAATCAGCATCATCATTGTCACATGCCAAAATGCTTGGGAGACTGTCTTCCTCTTAATTCCATTGTTTTGGCTGAATAATTGGTACCGGAAATATTACATTGCATCTTCTCGGGAACTGACTCGCCTTGATTCTATCACGAAAGCTCCGGTTATCCATCACTTCTCAGAGACCATTTCCGGTGTTATGACGATCCGGGGTTTCAGGAAGCAGGGAGCATTCTGTCAGGAAAATCTTGACAGGGTAAATGCAAGTCTCAGAATGGATTTCCACAACAATGGAGCAAACGAATGGCTCGGTTTTCGCTTGGACTTTACAGGAGTGGTTTTCCTTTGCATTGCCACTGTTTTCATGATCTTTCTGCCAAGTGCTATTATTAGGCCAGAATATGTTGGTTTATCTCTATCCTATGGCTTGGCCCTCAGTAGTCTCTTATCATTCACCATAAGCATGACTTGTTCTGTTGAGAATAAAATGGTTTCAGTTGAGAGGATAAAGCAGTTTACCAACCTTCCATCAGAAGCTCCATGGACAATCCCTGAGAGGACTCCTCCTCAGGATTGGCCTAGTCATGGCAACATTGAGTTAGATAACTTGCAGGTTAGGTATAGGTCAAATACTCCTCTAGTTCTCAAGGGAGTATCACTCACTATTCAAGGAGGAGAGAAGATTGGTGTTGTTGGCCGTACAGGGAGTGGGAAATCAACCCTCATCCAGGTGCTATTTAGGCTGATTGAGCCTTCAGCTGGAAAAATAATCATTGATGGAATCAACATTTGCAATGTGGGGCTTCATGATCTGAGGTCTAGATTCGGAATCATTCCCCAAGAGCCAATTCTCTTTCAAGGAACTGTAAGAAGCAACATTGATCCCCTTGGATTGTATTCAGATGAAGAAATTTGGAAGAGTCTCGAGCGCTGCCAATTGAAAGATGCAGTGACTGCAAAGCCTGAAAAACTTGAGGCTTCAGTGGTTGATGGAGGAGACAATTGGAGTGTGGGGCAAAAGCAGTTACTTTGCTTGGGCAGGATCATGCTCAAACACAGCAGGATACTATTCATGGATGAGGCAACGGCATCTGTTGATTCACAAACTGATGCTGTGATACAGAAGATCATCCGTGAGGACTTCGCGGATCGAACAATTATCAGTATTGCTCACAGAATACCAACAGTCATGGATTGTGACCGGGTTTTAGTCATAGATGCAGGTTATGCAAAGGAATTTGACAAACCATCACGTTTGCTAGAAAGGCCAACACTTTTTGGAGCATTGGTAAAGGAATATTCCAATAGAGCTTCAGAAGTATAA 4500 0.4331 MSSSSSSWLTSPSCSPLSVDSSSPTSQLVAQWLRFIFLSPCPQRLLLSAIDLIFLITLLAFAAQKIYSRFISNANSGSTITKPLLQDKDSDYKVTLWFKLPLLVTSLLALTYTVLSILAFTQSNLASWRQIEALFRLAQAITNIVIVILMVHEKKFKARKHPLSLRFYWIANFVAAFLFATSAIIRLVSVEESSLEANLRVDDVFSFINLAVSLFLFVIAIKGSSGIDAIRISDVIESSRTWLSNDRTTSLYGNASLFSKTVWLWMNPLLNKGYTTPLKLQDVPTLPLEFRAERMSELFQEYWPKPEENSKHPVGFTLLRCFWKHIAFTGFLAVVRLAVMYIGPVLIQSFVDFTSKANPSPYEGLVLISILLVAKSIEVLSVHQFNFHSQKLGMLIRSSIITSVYKKGLRLSSTARQAHGTGQIVNHMAVDAQQLSDLMLQLHPIWLMPLQVAAALALIYTYVGLSAVAALLGTAVVFVFTLIRTKKSNSFQFRIMMSRDLRMKAINELLNNMRVIKFQAWEDYFGNKIRQFRQAEHGWIGKFLYYFAVNMAILSSAPLLVTVLTFGTATFLGIPLNAGTVFSITSVIKILQEPVRTFPQALMLISQAMVSLGRLDEFMMSKERDENAVQRDDTCESDIAVEMKDAKFSWDDEEGNEALKVEELEIRRGDHAAVVGTVGSGKSSLLASVLGEMYKISGKVRVCGTVAYVAQTSWIQNATIQENILFGLPMNQKKYKEAIRVCCLDKDLEMMEHGDQTEIGERGINLSGGQKQRVQLARAVYQDCDIYLLDDIFSAVDAQTGSFIFKECVMGALRHKTILLVTHQVDFLHNVDSIMVMRDGRIVQSGKYDELLKAGLDFGALVAAHESAMEITETGDGSSQSPKLARIPSKEKESAGEKQSQEQSKSDKGSSKLIEEEERETGQVNLRVYKHYFTEAFGWWGVALMLAMSLAWIIAFLAGDYWLAFATSEAYTVPSFIFIIVYAAIAAVSCIVVMIRSFLFTYWGLKTSQSFFIGMLDSILHAPMSFFDTTPSGRILSRVSTDLLWVDISIPLLVSFVMVSYFSLISIIIVTCQNAWETVFLLIPLFWLNNWYRKYYIASSRELTRLDSITKAPVIHHFSETISGVMTIRGFRKQGAFCQENLDRVNASLRMDFHNNGANEWLGFRLDFTGVVFLCIATVFMIFLPSAIIRPEYVGLSLSYGLALSSLLSFTISMTCSVENKMVSVERIKQFTNLPSEAPWTIPERTPPQDWPSHGNIELDNLQVRYRSNTPLVLKGVSLTIQGGEKIGVVGRTGSGKSTLIQVLFRLIEPSAGKIIIDGINICNVGLHDLRSRFGIIPQEPILFQGTVRSNIDPLGLYSDEEIWKSLERCQLKDAVTAKPEKLEASVVDGGDNWSVGQKQLLCLGRIMLKHSRILFMDEATASVDSQTDAVIQKIIREDFADRTIISIAHRIPTVMDCDRVLVIDAGYAKEFDKPSRLLERPTLFGALVKEYSNRASEV 1499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01417 1499 MobiDBLite consensus disorder prediction 1 20 - -
Arst4g01417 1499 Pfam ABC transporter transmembrane region 328 595 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst4g01417 1499 Pfam ABC transporter transmembrane region 962 1184 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst4g01417 1499 MobiDBLite consensus disorder prediction 886 917 - -
Arst4g01417 1499 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 943 1220 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst4g01417 1499 CDD ABC_6TM_ABCC_D2 938 1232 IPR044726 GO:0140359
Arst4g01417 1499 FunFam ABC transporter C family member 3 1240 1491 - -
Arst4g01417 1499 FunFam ABC transporter C family member 10 310 623 - -
Arst4g01417 1499 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1257 1491 IPR003439 GO:0005524
Arst4g01417 1499 Pfam ABC transporter 1274 1422 IPR003439 GO:0005524
Arst4g01417 1499 Gene3D - 636 867 IPR027417 -
Arst4g01417 1499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1248 1490 IPR027417 -
Arst4g01417 1499 CDD ABCC_MRP_domain2 1255 1475 - -
Arst4g01417 1499 ProSitePatterns ABC transporters family signature. 766 780 IPR017871 GO:0005524|GO:0016887
Arst4g01417 1499 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 327 607 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst4g01417 1499 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 641 864 IPR003439 GO:0005524
Arst4g01417 1499 Gene3D ABC transporter type 1, transmembrane domain 904 1238 IPR036640 GO:0005524|GO:0016020
Arst4g01417 1499 Gene3D ABC transporter type 1, transmembrane domain 312 625 IPR036640 GO:0005524|GO:0016020
Arst4g01417 1499 SUPERFAMILY ABC transporter transmembrane region 316 619 IPR036640 GO:0005524|GO:0016020
Arst4g01417 1499 SUPERFAMILY ABC transporter transmembrane region 939 1243 IPR036640 GO:0005524|GO:0016020
Arst4g01417 1499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 638 860 IPR027417 -
Arst4g01417 1499 CDD ABC_6TM_ABCC_D1 328 615 IPR044746 GO:0140359
Arst4g01417 1499 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 254 1494 - -
Arst4g01417 1499 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 254 1494 - -
Arst4g01417 1499 Pfam ABC transporter 663 791 IPR003439 GO:0005524
Arst4g01417 1499 SMART AAA_5 1283 1467 IPR003593 GO:0016887
Arst4g01417 1499 SMART AAA_5 668 849 IPR003593 GO:0016887
Arst4g01417 1499 FunFam ABC transporter C family member 5 905 1238 - -
Arst4g01417 1499 Gene3D - 1241 1489 IPR027417 -
Arst4g01417 1499 FunFam ABC transporter C family member 4 624 883 - -
Arst4g01417 1499 MobiDBLite consensus disorder prediction 871 917 - -
Arst4g01417 1499 CDD ABCC_MRP_domain1 641 841 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01417 Arst-Chr4 17220528 17227469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01417 641 853 Calmodulin-binding Proteins AT2G36910 31.579 4.88e-23 105