Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01405 ATGGACGGCAACAAGGATGAGGCGCTGCGCTGCCTTCGAATAGCTGAGGAAGCGATCGCAGCCGGCAACAAATCCCGCGCCCTCAAATTCATCGGAATCGCTCAGCGGCTCAACCATAACCTCCCCGTCGATGATTTGCTGAACATGTGCGAGCACCTCGATTCTCAGTCCTCTGCGTCTTCTTCTTCTTCAGAACATAAAGGTAACGAAAATCGCGTTAAGAGCAAACCGAACGGTATATCGAAAACTGATGACGAGGGTTTGAACGAGGAGAGGAATTACACGGAGGAGAATGTGAAGTTGATTAGGGAAATTAAATTGAAGAGTGATTACTATGCGATCTTGGGAGTTGAGAAGAGTTGTTCGGTTGAAGAGATTAGAAAGGCTTATAGGAAACTTTCCTTGAAGGTTCATCCGGATAAGAACAAGGCACCAGGTTCCGGAGAGGCCTTTAAGAAGGTCTCAAAAGCATTTAAATGCTTGAGTGATGATAGTTCTAGAAGGCAGTATGATCAGACTGGATTGGTGGATGAATTCGAGTACAATCAGCAGTACAGCGTTCCGCGCCGGAGGAGGAGAACTGCAGCAAGCCGGGATTTCTTCGAGGATGATTTCGATCCGGACGAGATATTCAGGGCCTTTTTTGGACAATCTGATGTGTTTGGGAGGCAACATGTTTACAGGACAAGGGCAACCACCCATGATCATCATCATCAAAGACATGGTTTTCAGGGTGTTGCAGGTGGAACGGGGCTTAATGTTATGCTCCTTGTTCAGTTGTTGCCGTTCTTGATCATTTTGCTGCTTGCTTACCTGCCATTCTCTGAACCTGAGTATTCTCTGTACAAGAATTACTCATACCAGTTTCCCAAGACCATAGAGAATTATGGGATTCAATATTTCGTAAAGTCTCAAGCTTTTGATCGTAACTATCCACAGGGGAGTGCTGCTCGCACTACCATTGAGGACAATGTTATAAAAGATTATAAAAATATGCTTCGGCGTTATTGTCAGATTGAGATTCAGAGGCGGAGTTGGAATAGGAATCTGCCTACTCCTCACTGTGAAAAGTTGCAAAACTTTGGAGTAGTAGCCTGA 1098 0.4526 MDGNKDEALRCLRIAEEAIAAGNKSRALKFIGIAQRLNHNLPVDDLLNMCEHLDSQSSASSSSSEHKGNENRVKSKPNGISKTDDEGLNEERNYTEENVKLIREIKLKSDYYAILGVEKSCSVEEIRKAYRKLSLKVHPDKNKAPGSGEAFKKVSKAFKCLSDDSSRRQYDQTGLVDEFEYNQQYSVPRRRRRTAASRDFFEDDFDPDEIFRAFFGQSDVFGRQHVYRTRATTHDHHHQRHGFQGVAGGTGLNVMLLVQLLPFLIILLLAYLPFSEPEYSLYKNYSYQFPKTIENYGIQYFVKSQAFDRNYPQGSAARTTIEDNVIKDYKNMLRRYCQIEIQRRSWNRNLPTPHCEKLQNFGVVA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01405 365 Pfam Domain of unknown function (DUF1977) 275 344 IPR015399 -
Arst4g01405 365 PANTHER AT29763P-RELATED 1 360 - -
Arst4g01405 365 SUPERFAMILY Chaperone J-domain 109 222 IPR036869 -
Arst4g01405 365 CDD DnaJ 110 163 IPR001623 -
Arst4g01405 365 MobiDBLite consensus disorder prediction 67 91 - -
Arst4g01405 365 Pfam DnaJ domain 110 171 IPR001623 -
Arst4g01405 365 FunFam Chaperone protein dnaJ 49 106 226 - -
Arst4g01405 365 MobiDBLite consensus disorder prediction 54 91 - -
Arst4g01405 365 SMART dnaj_3 109 166 IPR001623 -
Arst4g01405 365 Gene3D DnaJ domain 107 228 IPR036869 -
Arst4g01405 365 PRINTS DnaJ domain signature 112 130 IPR001623 -
Arst4g01405 365 PRINTS DnaJ domain signature 146 166 IPR001623 -
Arst4g01405 365 PRINTS DnaJ domain signature 130 145 IPR001623 -
Arst4g01405 365 ProSiteProfiles dnaJ domain profile. 110 174 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01405 Arst-Chr4 16993135 16994648 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01405 4 171 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 27.168 2.92e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01405 K09518 - aew:130775182 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01405 4 16993135 16994648 Arst4g01405 4 16993135 16994648 ECH