Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01378 ATGACGATAAACAACAGCACTCCAAATCCAATAACACTCACTGAGGCGAATTCAAGAGGCTACAATCTCAGCGGCAAGATCATGCTAACCGCCATTATCCTCCTCTTCTTTCTCGTTCTCCTCATGCTCTCTCTCCACCTTTAGNNNNNCAACCTTCGCCGCCGCCGCACCAACATCGTCTTTTACATCGACCCTCCCACTCTCTCCGCTTCCCACGGCCTTGACCCCGCCCTCCTTGACTCTATTCCCATCTTCACCTACCACCCGCCAAATCCGCCGGAATGCGCCGTCTGCTTATCGGAGTTCGAACCGGGAGAAACTGGTCGGATCTTGCCAAAATGCAACCACGTGTTTCACACCGATTGCATAGACATGTGGTTCCATTCTCATACCACGTGTCCGCTATGCAGAGCTCCTGTGGAGCATCAACCCGAAGCGGAAACCCGACCCGAAGAAGTTGTTATAACGGTTTGCGAAAGCGAAACCGGTTCGAGTTCCGGGATCTGTCCGCAAGAAGTCAACCGGAGTGGAACTGGAACCGGAAGGGAGAGGAGGAAGCTTTCTCCGGTGATGGTGGAGCTTCCGGCGAGGACTAGCGAGGGTTTTAGTGACGAGTCAGGTGGTCACGAGTCGCCGCAGCTGTCGTCGTCGTCGTCGTTTCGTTCTCCGATGAGTCGAATGCTTTCGTTCAAAAGAATCCTCAGCAGGGAACGGAAAGGGAGCGTGTCTCCAGGCGGCAGTGGAAGTTGTAGCACCGCGGCTGAGGTGGGGGACGCAGAGCGAGGTGGTGAAAAAGAGGAGACTCTGAGATAG 813 0.5437 MTINNSTPNPITLTEANSRGYNLSGKIMLTAIILLFFLVLLMLSLHLYXXXNLRRRRTNIVFYIDPPTLSASHGLDPALLDSIPIFTYHPPNPPECAVCLSEFEPGETGRILPKCNHVFHTDCIDMWFHSHTTCPLCRAPVEHQPEAETRPEEVVITVCESETGSSSGICPQEVNRSGTGTGRERRKLSPVMVELPARTSEGFSDESGGHESPQLSSSSSFRSPMSRMLSFKRILSRERKGSVSPGGSGSCSTAAEVGDAERGGEKEETLR 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01378 271 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 18 157 IPR044675 -
Arst4g01378 271 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 148 IPR013083 -
Arst4g01378 271 ProSiteProfiles Zinc finger RING-type profile. 96 138 IPR001841 -
Arst4g01378 271 MobiDBLite consensus disorder prediction 167 271 - -
Arst4g01378 271 MobiDBLite consensus disorder prediction 206 226 - -
Arst4g01378 271 Pfam Ring finger domain 95 138 IPR001841 -
Arst4g01378 271 CDD RING-H2_EL5-like 95 138 - -
Arst4g01378 271 SUPERFAMILY RING/U-box 91 145 - -
Arst4g01378 271 SMART ring_2 96 137 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01378 Arst-Chr4 16378432 16379615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01378 1 266 Rapid Response to Elicitors AT3G16720 43.607 1.96e-69 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01378 - - gsj:114368044 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01378 4 16378432 16379615 Arst4g01378 4 16378432 16379615 ECH
Arst1g03395 1 94980126 94981416 Arst4g01378 4 16378432 16379615 PCT