Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01376 ATGGCGGAAGGCAGTAACGGAGACCAGAAGAAGAAACTGGCCATTATTAGCATCTCCATGATCCTTCTTGTGGCCATGATCGCGTCGGTGGCGATCGGCATAACCAGCCACCGAGAAAAAGGATCAAAGGGCAGAGAAGACGACGAGGAGGAGCCCCACGTGGCAAAATCTCAGAAGAATGTTGAGGTGATTTGCCAATCCACGGAATACAAAGAAACATGCGAAAAGAGTCTTGCAGATGCATCAACCAAAACCTCAGACATGAAAGAACTCATAAAAGCAGCATTTAACTACACAACGGTTGAGTTAGCAAGTCACATTGAAAACTCAACTTTATATCAAGAATTGGGAAAGGACAACATGACAAAACAAGCCTTGGACATATGCAAAGAAGTGTTGGGGTATGCAGTTGACGACATGCAAAAATCAATTGATAAAATGGACAAATTTGAATTAAGCAGAATCAATGAATATGCATATGATATCAAGGTTTGGGTGGCAGGCACCATTTCTCATCAGCAAACATGCTTAGCCGGCTTCGATAACACGTCGACAAAAGCCGGCGAAACCATGGCCAATGTGCTCAAAACCTCCCTAGAACTTAGTAGCAATGCCTTGGACATGATCAATGGAATATCCAAGGTACTCAAGCAATTCGACTTCAGCTCAATAACCGCCGCTAGTAGTACTAACCATAGGAGGCTTCTTGATGAAGAAACTTCCCATTCTAAGGATGGGATTCCTTCATGGGTGGGTGAAAGCCAAAGAAAGCTTATTAAGGCGGGTCCGACCGGCGGCATGGGTGGCATTGTTGGACAGCCTAATGCAGTTGTGGCTCAAGACGGCAGTGGACAGTTTACAACACTCACCGATGCTCTTAAAACCGTGCCAAAGAAGAACTCAAGTCCCTTCATAATTTACGTTAAGGCTGGCGTGTACAAAGAGTATGTCAATGTTGTCAAGAATATGGATCATGTCATAGTTGTTGGAGATGGCCCTGACAAGACTATATTCACCGGTAGCAAGAATTATGTGGATGGTGTCCAAACTTATAACACCGCAACCTTCGGTGTGAATGCTGCCAACTTCATGGCGAAGAATATCAGATTCGAGAACACAGCAGGGGCAGAAAAGCACCAAGCTGTGGCACTCAGAGTAACAGCAGACCAAGCCGTGTTCTACAACTGCCACATGGACGGTTTCCAAGACACGCTTTACGTCCAATCACAACGCCAATTCTACCGTGACTGCACCATAACAGGCACCGTAGACTTCGTATTCGGCGATGCAGCTGGAGTCTTCCAAAACTGCAAGCTACTAGTCCGAAAGCCGTTATCCAACCAACAATGCATGGTCACAGCAGGTGGCAGAACCAAAGTTGACAGCCCAACTGCATTGGTTTTCCAGAGCTGCTACTTCACCGGAGAGCCTCAACTTGCCACGTTGAAAACCAAGATTTCATACTTGGGTAGGCCGTGGAGGATATACTCCAAGGTGGTGATCATGGACTCCATCATTGATGATATCTTTGTGCCTGAAGGATATATGCCATGGATGGGAAGCGCGTTCAAGGACACGTGTACGTATTATGAGTATAACAACAAGGGTCCTGGTGCTGACACGTCGAAGAGGATTAACTGGCCTGGGTTTAAGGTCTTGAATTCTCTTGAAGCCATGAGTTACTATCCTGGAAGATTCTATGAGCTTGCTAATTCAACTGATCGTGATGGTTGGATCATTAACTCTGGTGTTCCGTACAGTCTTGGTCCCTTGCTTGCCACCACTAACGCCGGCACCACCGCTACACCTGTCCCCACTATCTTAACTGCCATGCCTGCAGCCACACCCGTTATTTCTGCAGCCAAAACCACAGCCTCAGCACCCGCCGCTGCCACCACTGCATAA 1905 0.4682 MAEGSNGDQKKKLAIISISMILLVAMIASVAIGITSHREKGSKGREDDEEEPHVAKSQKNVEVICQSTEYKETCEKSLADASTKTSDMKELIKAAFNYTTVELASHIENSTLYQELGKDNMTKQALDICKEVLGYAVDDMQKSIDKMDKFELSRINEYAYDIKVWVAGTISHQQTCLAGFDNTSTKAGETMANVLKTSLELSSNALDMINGISKVLKQFDFSSITAASSTNHRRLLDEETSHSKDGIPSWVGESQRKLIKAGPTGGMGGIVGQPNAVVAQDGSGQFTTLTDALKTVPKKNSSPFIIYVKAGVYKEYVNVVKNMDHVIVVGDGPDKTIFTGSKNYVDGVQTYNTATFGVNAANFMAKNIRFENTAGAEKHQAVALRVTADQAVFYNCHMDGFQDTLYVQSQRQFYRDCTITGTVDFVFGDAAGVFQNCKLLVRKPLSNQQCMVTAGGRTKVDSPTALVFQSCYFTGEPQLATLKTKISYLGRPWRIYSKVVIMDSIIDDIFVPEGYMPWMGSAFKDTCTYYEYNNKGPGADTSKRINWPGFKVLNSLEAMSYYPGRFYELANSTDRDGWIINSGVPYSLGPLLATTNAGTTATPVPTILTAMPAATPVISAAKTTASAPAAATTA 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01376 634 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 214 IPR035513 -
Arst4g01376 634 Pfam Plant invertase/pectin methylesterase inhibitor 61 208 IPR006501 GO:0004857
Arst4g01376 634 NCBIfam pectinesterase inhibitor domain 54 211 IPR006501 GO:0004857
Arst4g01376 634 SMART PMEI_2 56 208 IPR006501 GO:0004857
Arst4g01376 634 FunFam Pectinesterase 57 213 - -
Arst4g01376 634 MobiDBLite consensus disorder prediction 38 57 - -
Arst4g01376 634 FunFam Pectinesterase 4 272 590 - -
Arst4g01376 634 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 212 IPR035513 -
Arst4g01376 634 Gene3D - 273 591 IPR012334 -
Arst4g01376 634 ProSitePatterns Pectinesterase signature 2. 419 428 IPR033131 -
Arst4g01376 634 Pfam Pectinesterase 275 566 IPR000070 GO:0030599|GO:0042545
Arst4g01376 634 MobiDBLite consensus disorder prediction 37 57 - -
Arst4g01376 634 SUPERFAMILY Pectin lyase-like 273 568 IPR011050 -
Arst4g01376 634 CDD PMEI-like_3 64 214 - -
Arst4g01376 634 ProSitePatterns Pectinesterase signature 1. 300 319 IPR018040 -
Arst4g01376 634 PANTHER PECTINESTERASE 15 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01376 Arst-Chr4 16369673 16371705 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01376 9 634 Carbohydrate Esterase AT3G05610 43.790 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01376 K01051 - gmx:100784682 791.956