Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01374 ATGTGCCGCAACACACAAGAGGATCAAAACCTCTGTCGCGAGGTTCTAAGCCAAGTTGATGGGTCCTCTTCTTCTGACCCGAAAGCATACATCGATGCCGCCGTGAATGATATCAGAGACGGCGTCACCACCGCCTTAAAGATGATGACGATTAAGGAGGAGTTCTCCAAAGATGACAACGGAATCAAGATGGCCATTGATGGTTGCAAAGAAGTTATGGAATCCGCATTGAGCAGCCTCGACCTTTTCAGCAATGTGCTTCGCAGCAATCACGACATTACCTCCTTGCAATCGCAAACTCCCGACCTCAAGAACTGGCTTAGTGCCGTTATCTCATATCAGCAATCTTGTGTTTCCATCATAAGTCTCGATATTGTTACTGGTTTGGCTAAGATCATTGAAGATCTTGGTCTGCATGTGGAAATGAAACCCATTGCTTCTTCTGGACGTGTTCTTCGCGAAGAGGTTGATAACGAGGGGTTCCCCGATTGGTTTTCCTCTTCAGATCGCAAGTTGTTGGCAAAGGATGTGAAGTTTCATGTTCCAAATGTAGTGGTTGCTAAAGATGGTAGTGGAAACTTTAGGACGGTTCAGGATGCAATTAACTCGTATCCAAAGACAAAAAATTTTCAGGAAAGGTACATTATCTATGTTAAGGCGGGGATTTATAAGGAGAATTGTACAGTTCCATCTCATGCAATGAATATTTTCATGTATGGCGATGGCCCTACTAAGACCATTATCACTGCTAGTATGAGCAATGACATGAGGTTCGAGAATGCAGCTGGTGCAAAAGGGCACCAAGCAGTTGCACTCAGAAATGTAGGAGATTTTTCAGCTTTTTATAACTGCCACATACATGGTTATCAAGACACTTTGTATGTTCAAGCTAATAGACAATTCTACCGCAACTGCGAAATTGCTGGAACAGTTGACTTTATTTTCGGTACATCCCCCACCATGATCCAAAGAAGCAAGCTCATCGTGAGGATGCCCTTGCCAACTCAATTCAATGTGTTGGTCGCAGATGGCACCGTCGAAAGGAACATGACTACTGGCATTGTGATTCAGGGATGCCAGATTGTTCCAGATCCATCTGTCAAATACCAAATCAAGACTTATTTGGGTAGGCCATGGAAAGAAGGATCGAGAGCAGTAATTATGGAATCATATCTGGGTGATTGGATTAATCCGGAAGGGTGGGCCCCTCATGCTACCAATGAGATGAAAAGCTTCTTAGATATTTGTGAGTATGGAAATACCGGACCAGCTGTTTCAGTTCATGGAAGAATCAAGTGGAAGGGATATCGTGGTATAATAACCAAGAATGAAGCCATGCGATTCACTGTTGGTGAATTCCTCAAGGGTGGACCTAACAATAGTGCTGACCAATGGTTGAACGCTCTTAGTGTTCCTTTTGAAAGTGGTTTTGTAAGACCATAA 1443 0.4359 MCRNTQEDQNLCREVLSQVDGSSSSDPKAYIDAAVNDIRDGVTTALKMMTIKEEFSKDDNGIKMAIDGCKEVMESALSSLDLFSNVLRSNHDITSLQSQTPDLKNWLSAVISYQQSCVSIISLDIVTGLAKIIEDLGLHVEMKPIASSGRVLREEVDNEGFPDWFSSSDRKLLAKDVKFHVPNVVVAKDGSGNFRTVQDAINSYPKTKNFQERYIIYVKAGIYKENCTVPSHAMNIFMYGDGPTKTIITASMSNDMRFENAAGAKGHQAVALRNVGDFSAFYNCHIHGYQDTLYVQANRQFYRNCEIAGTVDFIFGTSPTMIQRSKLIVRMPLPTQFNVLVADGTVERNMTTGIVIQGCQIVPDPSVKYQIKTYLGRPWKEGSRAVIMESYLGDWINPEGWAPHATNEMKSFLDICEYGNTGPAVSVHGRIKWKGYRGIITKNEAMRFTVGEFLKGGPNNSADQWLNALSVPFESGFVRP 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01374 480 SUPERFAMILY Pectin lyase-like 183 456 IPR011050 -
Arst4g01374 480 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 1 119 IPR035513 -
Arst4g01374 480 Gene3D - 179 477 IPR012334 -
Arst4g01374 480 PANTHER PECTINESTERASE 1 467 - -
Arst4g01374 480 ProSitePatterns Pectinesterase signature 2. 307 316 IPR033131 -
Arst4g01374 480 Pfam Pectinesterase 252 456 IPR000070 GO:0030599|GO:0042545
Arst4g01374 480 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 135 IPR035513 -
Arst4g01374 480 CDD PMEI-like_3 1 122 - -
Arst4g01374 480 SMART PMEI_2 1 152 IPR006501 GO:0004857
Arst4g01374 480 Pfam Plant invertase/pectin methylesterase inhibitor 1 119 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01374 Arst-Chr4 16135527 16137911 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01374 25 477 Carbohydrate Esterase AT4G33230 35.388 4.60e-96 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01374 K01051 - gmx:100775246 491.5