Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01370 ATGGAAAAGAAGGAAAAAATCATAGTTTTAGTGGTTGTTTCGCTTTCGCTCATCCTTGTAGCGGGGGTTGCCACCGGGGTCATCATGGTCGTTAATAACAAAAAAAGCAATGGCGCTGAAGTGCAAAACACTAAAGAAAGATTCACAAGTCTCATGTGCCGCAACACACAAGAGGATCAAAACCTCTGTCGCGAGGTTCTAAGCCAAGTTGATGGTTCCTCTTCTTCCGACCCGAAAGCATACATCGACGCTGCCGTGAACGATATCAGAGACGGTGTCACCACCGCCCTAAAGATGATGACAACTGAGGAGGAGTTCTCCAAAGATAACAACGGAATCAAGATGGCCATTGATGGTTGCAAAGAAGTCATGGAGTCCGCATTGAGCACCCTTGACCTTTTCAGCAACGTGCTTCGCAGTAATCACGACATTAACTTCGTGCAAACGCAAAGCCCCGACCTCAGAAACTGGCTTAGCACTGTTATCTCATATCAGCAATCTTGTGTTGACATTTTTGAGGATCAAAATGAAGGAGAGAGAAAAATCAAAGAACAACTACAAAGCAAGAGTTTGGATCGTGTTGAGAAGGTTTCCATCATAACTCTCGATATTGTTACTGGTTTGGCTAAAATCATTGAAGATCTTGGTCTGCATGTGGAAATAAAACCCATTGCTTCTTTTGGGCGTGTTCTTCGCGAAGAGGTTGATAACGAGGGGTTTCCCGATTGGTTTTCCTCTTCAGATCGCAAGCTGTTGGTGAAGGATGTGAAGTTTCATATCCCAAATGTAGTGGTTGCTAAAGATGGTAGTGGAAACTTTAGGACGGTTCAGGATGCAATTAACTCGTATCCAAAGGCAAAGAATTTTCAGGGAAGGTACATTATCTATGTTAAGGCGGGGATCTATAAGGAGAATTGTACGGTTCCATCTCATGCAATGAACGTTTTCATGTATGGAGATGGCCCTACTAAGACCATTATAACTGCTAGTATGAGCAATGTCACCCACAACCTCAAGACCATGTTTACTGCCACTTTCGTGAATAAAGCGGGAATGTTTCTTGCGAAGGACATGAGATTCGAGAACGCAGCTGGTGCAGAAGGACACCAAGCAGTTGCACTCAGAAATGTGGGAGATTTTTCAGCTTTCTATAACTGCCACATACATGGTTATCAAGACACCTTATATGTTCAAGCCAACAGACAATTCTATCGCAACTGTGAAATCGCTGGGACAGTTGACTTTATTTTCGGTACATCTCCCGCTGTGATCCAAAGAAGCAAGCTCATTGTGAGAAAGCCCTTGCCAACTCAGTTCAATGTGTTGATCGCAGATGGCACCGTCCAGAGGAACATGACTACTGGCATTGTGATTCAGGGATGCCAGATTGTTCCAGATCCAATGTTTGACCCTGTCAAGTACCAAATGAAGACTTATTTGGGTAGGCCATGGAAGGAAGGATCGAGAGTAGTAATCATGGAATCATATCTGGGTGACTGGATTAATCTGGAAGGGTGGGCCCCTCATGATGGCAATGAAATGAAAGGCTTCTTAGATATTTGTGAGTATGGAAATACCGGACCTGCTGCTTTAGTTCATGGAAGAATTAAGTGGAAAGGGTATCGTGGTATGATAACTAAGAATGAAGCCATGCGATTCACTGTTGCTGAATTCCTCAAGGGTGGACCTAACAATGGTGCTGACAGATGGTTGAACGCTCTTGGTGTTCCTTTTGACAGTGATTTTCTAAGACCATAA 1758 0.4374 MEKKEKIIVLVVVSLSLILVAGVATGVIMVVNNKKSNGAEVQNTKERFTSLMCRNTQEDQNLCREVLSQVDGSSSSDPKAYIDAAVNDIRDGVTTALKMMTTEEEFSKDNNGIKMAIDGCKEVMESALSTLDLFSNVLRSNHDINFVQTQSPDLRNWLSTVISYQQSCVDIFEDQNEGERKIKEQLQSKSLDRVEKVSIITLDIVTGLAKIIEDLGLHVEIKPIASFGRVLREEVDNEGFPDWFSSSDRKLLVKDVKFHIPNVVVAKDGSGNFRTVQDAINSYPKAKNFQGRYIIYVKAGIYKENCTVPSHAMNVFMYGDGPTKTIITASMSNVTHNLKTMFTATFVNKAGMFLAKDMRFENAAGAEGHQAVALRNVGDFSAFYNCHIHGYQDTLYVQANRQFYRNCEIAGTVDFIFGTSPAVIQRSKLIVRKPLPTQFNVLIADGTVQRNMTTGIVIQGCQIVPDPMFDPVKYQMKTYLGRPWKEGSRVVIMESYLGDWINLEGWAPHDGNEMKGFLDICEYGNTGPAALVHGRIKWKGYRGMITKNEAMRFTVAEFLKGGPNNGADRWLNALGVPFDSDFLRP 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01370 585 ProSitePatterns Pectinesterase signature 2. 409 418 IPR033131 -
Arst4g01370 585 SMART PMEI_2 44 204 IPR006501 GO:0004857
Arst4g01370 585 Gene3D - 259 582 IPR012334 -
Arst4g01370 585 Pfam Plant invertase/pectin methylesterase inhibitor 52 204 IPR006501 GO:0004857
Arst4g01370 585 PANTHER PECTINESTERASE 20 572 - -
Arst4g01370 585 FunFam Pectinesterase 4 259 582 - -
Arst4g01370 585 Pfam Pectinesterase 262 561 IPR000070 GO:0030599|GO:0042545
Arst4g01370 585 NCBIfam pectinesterase inhibitor domain 36 206 IPR006501 GO:0004857
Arst4g01370 585 CDD PMEI-like_3 51 210 - -
Arst4g01370 585 SUPERFAMILY Pectin lyase-like 262 578 IPR011050 -
Arst4g01370 585 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 209 IPR035513 -
Arst4g01370 585 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 202 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01370 Arst-Chr4 15891831 15893971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01370 73 577 Carbohydrate Esterase AT4G33230 39.139 3.09e-109 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01370 K01051 - gmx:100815015 594.734